PROTEIN: HRGMv2_2941_2_5
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Protein File & Metadata
Source:
HRGMv2_2941_2_5.pdb
Genome ID:
Protein ID:
HRGMv2_2941_2_5
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Detailed structural information will appear here after analysis...
Protein Sequence
MRKLLEDKRR FSTAVFFVIL CLVFFRFCYY GFTYYWQADD YIQYYAYTHR GPLPEVIASV 60 GLLSARPLAG LGDVYFWANF SGCMIVAVLL VSAMYAASAV LFWRVFNRKF GTGPVFLVVY 120 TLMPIAFEGT YWLSASTRIV TGLFFASLAL YFFCRYVDSG GKRRLIAFMI SMVISCGFYE 180 QTLVFAVAAV LLFALLEVGK NRRALWGLFA VAAMGLYFVY ISAMPSDSIF SKRTEITLPF 240 RDADYFTDFF PLTMKNIDEA AISASWSTIA RGGMRGLRYI VADGAYFYLI LAVIFAAALA 300 ALFWHRKDKM RKPVAAIVVA LLLVIAPVTP FLVLKAGGYG LRCVTASLCG FALLVDTLLA 360 VIFRNRRSVM CVIAAILAVG MSICIVSELH DYRETTLMDN KIASLAAEKL AADGIEERGK 420 KACIINVKSD YLEEQNYYGK RYIHGCTDST WAFSGMLECY MGYERPLVTP LSVNTWHYNE 480 LLDAEYDASY LYTGDELIPV TVSKTDTGWD LFDMNGELAA VIDFAASTLT FVK 533
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9CC27-F1-model_v4 | 1 | 529 | 17 | 521 | 0.6413 |
0.6911 |
| AF-O06152-F1-model_v4 | 1 | 529 | 47 | 550 | 0.6237 |
0.6889 |
| AF-Q8ZKK1-F1-model_v4 | 14 | 520 | 9 | 500 | 0.6167 |
0.6741 |
| AF-Q8ZP99-F1-model_v4 | 1 | 520 | 2 | 494 | 0.6131 |
0.6694 |
| AF-Q8ZR61-F1-model_v4 | 3 | 533 | 1 | 511 | 0.6111 |
0.6644 |
| AF-I6Y460-F1-model_v4 | 3 | 533 | 2 | 591 | 0.6035 |
0.6526 |
| AF-Q2FXN8-F1-model_v4 | 10 | 495 | 5 | 495 | 0.5953 |
0.647 |
| AF-Q9HUZ2-F1-model_v4 | 14 | 529 | 8 | 469 | 0.5939 |
0.667 |
| AF-G5EDN2-F1-model_v4 | 9 | 531 | 1 | 489 | 0.5858 |
0.6371 |
| AF-Q7AQM1-F1-model_v4 | 26 | 533 | 1 | 569 | 0.5827 |
0.6438 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q036W1-F1-model_v4 | GT0 | 1 | 529 | 2 | 508 | 0.69 |
0.7278 |
| AF-Q7UDK9-F1-model_v4 | GT0 | 1 | 524 | 1 | 479 | 0.6694 |
0.7297 |
| AF-A0A0H2UXC8-F1-model_v4 | GT0 | 1 | 524 | 1 | 479 | 0.669 |
0.7291 |
| AF-I0H3R1-F1-model_v4 | GT83 | 1 | 531 | 1 | 477 | 0.662 |
0.722 |
| AF-A0A3T1AZA5-F1-model_v4 | GT83 | 1 | 515 | 8 | 485 | 0.6585 |
0.7169 |
| AF-Q1IJH5-F1-model_v4 | GT83 | 1 | 533 | 7 | 481 | 0.658 |
0.7185 |
| AF-E4NCG6-F1-model_v4 | GT83 | 11 | 515 | 1 | 470 | 0.6575 |
0.7162 |
| A0A316B179 | GT83 | 3 | 533 | 15 | 485 | 0.6563 |
0.7246 |
| AF-A0A7H8KST0-F1-model_v4 | GT83 | 3 | 529 | 1 | 471 | 0.655 |
0.7184 |
| AF-A0A2H5AZW5-F1-model_v4 | GT83 | 8 | 516 | 1 | 473 | 0.6542 |
0.7108 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| I0H3R1 | GT83 | 1 | 531 | 1 | 477 | 0.662 |
0.722 |
| A0A3T1AZA5 | GT83 | 1 | 515 | 8 | 485 | 0.6585 |
0.7169 |
| Q1IJH5 | GT83 | 1 | 533 | 7 | 481 | 0.658 |
0.7185 |
| A0A316B179 | GT83 | 3 | 533 | 15 | 485 | 0.6563 |
0.7246 |
| A0A3N1I944 | GT83 | 1 | 516 | 19 | 499 | 0.6542 |
0.7168 |
| A0A0F0L4U4 | GT83 | 1 | 533 | 1 | 489 | 0.6535 |
0.7017 |
| A0A7D3ZKU3 | GT83 | 18 | 514 | 1 | 460 | 0.6534 |
0.7179 |
| A0A1A8ZIE0 | GT83 | 1 | 516 | 23 | 508 | 0.6531 |
0.7157 |
| A0A120F7X7 | GT83 | 4 | 516 | 25 | 510 | 0.6525 |
0.7152 |
| A0A1H2NJF7 | GT83 | 1 | 517 | 18 | 519 | 0.6523 |
0.7 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q1MJ97-F1-model_v4 | 2 | 501 | 1 | 488 | 0.6215 |
0.6732 |
| AF-P46978-F1-model_v4 | 2 | 533 | 9 | 673 | 0.5511 |
0.6402 |
| AF-Q2KJI2-F1-model_v4 | 2 | 533 | 9 | 673 | 0.5507 |
0.6396 |