Cluster: HRGMv2_2928_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2928
- CGC Family ID: CGCFAM_02456
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2928_8 | HRGMv2_2928_8_81 | 87521 | 89113 | + | GH13_20 |
| TF | HRGMv2_2928_8 | HRGMv2_2928_8_82 | 89651 | 90664 | + | LacI |
| NULL(UNKNOWN) | HRGMv2_2928_8 | HRGMv2_2928_8_83 | 90751 | 92313 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2928_8 | HRGMv2_2928_8_84 | 92439 | 93476 | + | 3.A.1.1.44 |
| TC | HRGMv2_2928_8 | HRGMv2_2928_8_85 | 93473 | 94330 | + | 3.A.1.1.36 |
Gene ID: HRGMv2_2928_8_81
Type: CAZyme
Location: 87521 - 89113 (+)
Type: CAZyme
Location: 87521 - 89113 (+)
Gene ID: HRGMv2_2928_8_82
Type: TF
Location: 89651 - 90664 (+)
Type: TF
Location: 89651 - 90664 (+)
Gene ID: HRGMv2_2928_8_83
Type:
Location: 90751 - 92313 (+)
Type:
Location: 90751 - 92313 (+)
Gene ID: HRGMv2_2928_8_84
Type: TC
Location: 92439 - 93476 (+)
Type: TC
Location: 92439 - 93476 (+)
Gene ID: HRGMv2_2928_8_85
Type: TC
Location: 93473 - 94330 (+)
Type: TC
Location: 93473 - 94330 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA5884
Species
UBA5884 sp018376535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.