Cluster: HRGMv2_2928_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2928
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2928_7 | HRGMv2_2928_7_18 | 13487 | 15124 | + | GH77 |
| CAZyme | HRGMv2_2928_7 | HRGMv2_2928_7_19 | 15117 | 17465 | + | GT35 |
| TF | HRGMv2_2928_7 | HRGMv2_2928_7_20 | 18017 | 18472 | + | HTH_11 |
| TC | HRGMv2_2928_7 | HRGMv2_2928_7_21 | 18493 | 19818 | + | 2.A.66.1.37 |
Gene ID: HRGMv2_2928_7_18
Type: CAZyme
Location: 13487 - 15124 (+)
Type: CAZyme
Location: 13487 - 15124 (+)
Gene ID: HRGMv2_2928_7_19
Type: CAZyme
Location: 15117 - 17465 (+)
Type: CAZyme
Location: 15117 - 17465 (+)
Gene ID: HRGMv2_2928_7_20
Type: TF
Location: 18017 - 18472 (+)
Type: TF
Location: 18017 - 18472 (+)
Gene ID: HRGMv2_2928_7_21
Type: TC
Location: 18493 - 19818 (+)
Type: TC
Location: 18493 - 19818 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA5884
Species
UBA5884 sp018376535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.