Cluster: HRGMv2_2928_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2928
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2928_2 | HRGMv2_2928_2_186 | 194323 | 195540 | - | GH3 |
| pfam | HRGMv2_2928_2 | HRGMv2_2928_2_187 | 195604 | 197331 | - | Methyltransf_11 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | HRGMv2_2928_2 | HRGMv2_2928_2_188 | 197416 | 198771 | - | 9.B.18.1.3 |
| CAZyme | HRGMv2_2928_2 | HRGMv2_2928_2_189 | 198965 | 201112 | - | CBM79 | GH5_4 |
Gene ID: HRGMv2_2928_2_186
Type: CAZyme
Location: 194323 - 195540 (-)
Type: CAZyme
Location: 194323 - 195540 (-)
Gene ID: HRGMv2_2928_2_187
Type: pfam
Location: 195604 - 197331 (-)
Type: pfam
Location: 195604 - 197331 (-)
Gene ID: HRGMv2_2928_2_188
Type: TC
Location: 197416 - 198771 (-)
Type: TC
Location: 197416 - 198771 (-)
Gene ID: HRGMv2_2928_2_189
Type: CAZyme
Location: 198965 - 201112 (-)
Type: CAZyme
Location: 198965 - 201112 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA5884
Species
UBA5884 sp018376535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.