Cluster: HRGMv2_2928_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate: beta-glucan
- Genome ID: HRGMv2_2928
- CGC Family ID: CGCFAM_01808
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2928_23 | HRGMv2_2928_23_19 | 21172 | 23748 | - | CBM35 | GH26 |
| CAZyme | HRGMv2_2928_23 | HRGMv2_2928_23_20 | 23841 | 26300 | - | GH9 |
| TC | HRGMv2_2928_23 | HRGMv2_2928_23_21 | 26467 | 27849 | - | 2.A.66.1.13 |
Gene ID: HRGMv2_2928_23_19
Type: CAZyme
Location: 21172 - 23748 (-)
Type: CAZyme
Location: 21172 - 23748 (-)
Gene ID: HRGMv2_2928_23_20
Type: CAZyme
Location: 23841 - 26300 (-)
Type: CAZyme
Location: 23841 - 26300 (-)
Gene ID: HRGMv2_2928_23_21
Type: TC
Location: 26467 - 27849 (-)
Type: TC
Location: 26467 - 27849 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA5884
Species
UBA5884 sp018376535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.