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Cluster: HRGMv2_2928_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2928_11 HRGMv2_2928_11_24 30010 30921 + 1.A.35.3.2
TC HRGMv2_2928_11 HRGMv2_2928_11_25 31134 32312 + 2.A.36.2.1
CAZyme HRGMv2_2928_11 HRGMv2_2928_11_26 32364 33005 + CE4
TC HRGMv2_2928_11 HRGMv2_2928_11_27 33055 36306 - 9.B.74.1.3
STP HRGMv2_2928_11 HRGMv2_2928_11_28 36511 37092 + TetR_N
TC HRGMv2_2928_11 HRGMv2_2928_11_29 37298 38647 - 3.A.1.122.2
TC HRGMv2_2928_11 HRGMv2_2928_11_30 38647 39345 - 3.A.1.122.2
Gene ID: HRGMv2_2928_11_24
Type: TC
Location: 30010 - 30921 (+)
Gene ID: HRGMv2_2928_11_25
Type: TC
Location: 31134 - 32312 (+)
Gene ID: HRGMv2_2928_11_26
Type: CAZyme
Location: 32364 - 33005 (+)
Gene ID: HRGMv2_2928_11_27
Type: TC
Location: 33055 - 36306 (-)
Gene ID: HRGMv2_2928_11_28
Type: STP
Location: 36511 - 37092 (+)
Gene ID: HRGMv2_2928_11_29
Type: TC
Location: 37298 - 38647 (-)
Gene ID: HRGMv2_2928_11_30
Type: TC
Location: 38647 - 39345 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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