Cluster: HRGMv2_2928_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2928
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2928_11 | HRGMv2_2928_11_4 | 5370 | 6779 | + | 1.C.111.1.4 |
| CAZyme | HRGMv2_2928_11 | HRGMv2_2928_11_5 | 6845 | 8986 | - | GH13_11 |
| STP | HRGMv2_2928_11 | HRGMv2_2928_11_6 | 9133 | 11067 | - | GGDEF | Peripla_BP_3 |
| CAZyme | HRGMv2_2928_11 | HRGMv2_2928_11_7 | 11260 | 13122 | - | GH13_9 |
Gene ID: HRGMv2_2928_11_4
Type: TC
Location: 5370 - 6779 (+)
Type: TC
Location: 5370 - 6779 (+)
Gene ID: HRGMv2_2928_11_5
Type: CAZyme
Location: 6845 - 8986 (-)
Type: CAZyme
Location: 6845 - 8986 (-)
Gene ID: HRGMv2_2928_11_6
Type: STP
Location: 9133 - 11067 (-)
Type: STP
Location: 9133 - 11067 (-)
Gene ID: HRGMv2_2928_11_7
Type: CAZyme
Location: 11260 - 13122 (-)
Type: CAZyme
Location: 11260 - 13122 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA5884
Species
UBA5884 sp018376535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.