Cluster: HRGMv2_2928_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2928
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2928_9 | HRGMv2_2928_9_31 | 26039 | 29302 | + | CBM22 | CBM22 | CBM9 | GH10 |
| TC | HRGMv2_2928_9 | HRGMv2_2928_9_32 | 29631 | 30977 | + | 1.A.26.1.2 |
| pfam | HRGMv2_2928_9 | HRGMv2_2928_9_33 | 31048 | 32010 | - | cobW | DUF1980_C |
| TC | HRGMv2_2928_9 | HRGMv2_2928_9_34 | 32022 | 33155 | - | 9.B.10.1.1 |
Gene ID: HRGMv2_2928_9_31
Type: CAZyme
Location: 26039 - 29302 (+)
Type: CAZyme
Location: 26039 - 29302 (+)
Gene ID: HRGMv2_2928_9_32
Type: TC
Location: 29631 - 30977 (+)
Type: TC
Location: 29631 - 30977 (+)
Gene ID: HRGMv2_2928_9_33
Type: pfam
Location: 31048 - 32010 (-)
Type: pfam
Location: 31048 - 32010 (-)
Gene ID: HRGMv2_2928_9_34
Type: TC
Location: 32022 - 33155 (-)
Type: TC
Location: 32022 - 33155 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA5884
Species
UBA5884 sp018376535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.