Cluster: HRGMv2_2928_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2928
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2928_9 | HRGMv2_2928_9_2 | 110 | 529 | + | 1.E.19.1.2 |
| NULL(UNKNOWN) | HRGMv2_2928_9 | HRGMv2_2928_9_3 | 545 | 718 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2928_9 | HRGMv2_2928_9_4 | 735 | 914 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2928_9 | HRGMv2_2928_9_5 | 914 | 1630 | + | GH25 |
Gene ID: HRGMv2_2928_9_2
Type: TC
Location: 110 - 529 (+)
Type: TC
Location: 110 - 529 (+)
Gene ID: HRGMv2_2928_9_3
Type:
Location: 545 - 718 (+)
Type:
Location: 545 - 718 (+)
Gene ID: HRGMv2_2928_9_4
Type:
Location: 735 - 914 (+)
Type:
Location: 735 - 914 (+)
Gene ID: HRGMv2_2928_9_5
Type: CAZyme
Location: 914 - 1630 (+)
Type: CAZyme
Location: 914 - 1630 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA5884
Species
UBA5884 sp018376535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.