Cluster: HRGMv2_2928_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2928
- CGC Family ID: CGCFAM_10235
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2928_1 | HRGMv2_2928_1_45 | 52747 | 53442 | + | 1.C.82.1.1 |
| pfam | HRGMv2_2928_1 | HRGMv2_2928_1_46 | 54114 | 54359 | + | IreB |
| CAZyme | HRGMv2_2928_1 | HRGMv2_2928_1_47 | 54444 | 55190 | + | CE4 |
Gene ID: HRGMv2_2928_1_45
Type: TC
Location: 52747 - 53442 (+)
Type: TC
Location: 52747 - 53442 (+)
Gene ID: HRGMv2_2928_1_46
Type: pfam
Location: 54114 - 54359 (+)
Type: pfam
Location: 54114 - 54359 (+)
Gene ID: HRGMv2_2928_1_47
Type: CAZyme
Location: 54444 - 55190 (+)
Type: CAZyme
Location: 54444 - 55190 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UBA5884
Species
UBA5884 sp018376535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.