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Cluster: HRGMv2_2920_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2920_19 HRGMv2_2920_19_23 27697 30252 - CBM67 | GH78
pfam HRGMv2_2920_19 HRGMv2_2920_19_24 30271 30669 - dCMP_cyt_deam_1
CAZyme HRGMv2_2920_19 HRGMv2_2920_19_25 30880 32397 + GH51_1
NULL(UNKNOWN) HRGMv2_2920_19 HRGMv2_2920_19_26 32587 33024 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2920_19 HRGMv2_2920_19_27 33042 35279 - GT4
pfam HRGMv2_2920_19 HRGMv2_2920_19_28 35332 36303 - PseudoU_synth_2
pfam HRGMv2_2920_19 HRGMv2_2920_19_29 36296 36784 - ThrE | ThrE_2
TC HRGMv2_2920_19 HRGMv2_2920_19_30 36781 37557 - 2.A.79.1.5
Gene ID: HRGMv2_2920_19_23
Type: CAZyme
Location: 27697 - 30252 (-)
Gene ID: HRGMv2_2920_19_24
Type: pfam
Location: 30271 - 30669 (-)
Gene ID: HRGMv2_2920_19_25
Type: CAZyme
Location: 30880 - 32397 (+)
Gene ID: HRGMv2_2920_19_26
Type:
Location: 32587 - 33024 (-)
Gene ID: HRGMv2_2920_19_27
Type: CAZyme
Location: 33042 - 35279 (-)
Gene ID: HRGMv2_2920_19_28
Type: pfam
Location: 35332 - 36303 (-)
Gene ID: HRGMv2_2920_19_29
Type: pfam
Location: 36296 - 36784 (-)
Gene ID: HRGMv2_2920_19_30
Type: TC
Location: 36781 - 37557 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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