PROTEIN: HRGMv2_2920_19_26
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Protein File & Metadata
Source:
HRGMv2_2920_19_26.pdb
Genome ID:
Protein ID:
HRGMv2_2920_19_26
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Detailed structural information will appear here after analysis...
Protein Sequence
MSEKDIQQKM AALARELIEK RYPVGWGGAA VIRTAADHYF TSVAIETANS SAILCIEVGA 60 MCEAHKVNEK VTHCLCLVRD DETSPYKVLS PCGICQERLR YWGGDVQVGV TTASGGLKFV 120 TLDELQPYHW SGAYPPEELE HFSPN 145
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q09190-F1-model_v4 | 2 | 139 | 1 | 133 | 0.7584 |
0.8208 |
| AF-Q9CBD3-F1-model_v4 | 1 | 135 | 1 | 128 | 0.7479 |
0.8401 |
| AF-A0A175W7L8-F1-model_v4 | 3 | 142 | 7 | 143 | 0.7365 |
0.8357 |
| AF-A0A2R8RZC9-F1-model_v4 | 1 | 139 | 2 | 135 | 0.7361 |
0.8099 |
| AF-F1QSJ0-F1-model_v4 | 1 | 139 | 1 | 132 | 0.7309 |
0.8006 |
| AF-A0A132ZJ50-F1-model_v4 | 1 | 138 | 1 | 132 | 0.729 |
0.7967 |
| AF-P56389-F1-model_v4 | 1 | 139 | 9 | 144 | 0.7269 |
0.8051 |
| AF-D4AC20-F1-model_v4 | 1 | 139 | 9 | 144 | 0.7265 |
0.8048 |
| AF-P32320-F1-model_v4 | 1 | 139 | 9 | 144 | 0.7245 |
0.8038 |
| AF-A0A077ZIE7-F1-model_v4 | 1 | 138 | 1 | 130 | 0.7241 |
0.7972 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3b8f-assembly1.cif.gz_C | 5 | 144 | 1 | 140 | 0.9201 |
0.9538 |
| 2z3i-assembly1.cif.gz_D | 2 | 140 | 1 | 129 | 0.7902 |
0.8646 |
| 2z3g-assembly1.cif.gz_B | 3 | 134 | 2 | 127 | 0.7895 |
0.8758 |
| 2z3j-assembly1.cif.gz_D | 3 | 130 | 1 | 124 | 0.7865 |
0.8754 |
| 3oj6-assembly1.cif.gz_C | 3 | 139 | 3 | 128 | 0.7794 |
0.8682 |
| 6kw6-assembly1.cif.gz_A | 3 | 131 | 1 | 119 | 0.7527 |
0.8537 |
| 2fr6-assembly1.cif.gz_A | 2 | 138 | 1 | 137 | 0.751 |
0.8039 |
| 1mq0-assembly1.cif.gz_A | 1 | 139 | 1 | 130 | 0.7468 |
0.8178 |
| 1ux1-assembly1.cif.gz_D | 1 | 138 | 1 | 131 | 0.7223 |
0.7931 |
| 1jtk-assembly1.cif.gz_A | 5 | 138 | 1 | 131 | 0.7218 |
0.793 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P33967-F1-model_v4 | 2 | 134 | 5 | 140 | 0.7919 |
0.8752 |
| AF-P0C2P1-F1-model_v4 | 2 | 135 | 2 | 130 | 0.7855 |
0.8624 |
| AF-Q09190-F1-model_v4 | 2 | 139 | 1 | 133 | 0.7584 |
0.8208 |
| AF-P0CI02-F1-model_v4 | 3 | 141 | 6 | 133 | 0.7583 |
0.8614 |
| AF-P56389-F1-model_v4 | 1 | 139 | 9 | 144 | 0.7269 |
0.8051 |
| AF-P32320-F1-model_v4 | 1 | 139 | 9 | 144 | 0.7245 |
0.8038 |
| AF-Q9KD53-F1-model_v4 | 1 | 138 | 1 | 131 | 0.7152 |
0.7879 |
| AF-P19079-F1-model_v4 | 1 | 138 | 1 | 131 | 0.7134 |
0.796 |
| AF-Q9S3M0-F1-model_v4 | 1 | 139 | 1 | 132 | 0.7114 |
0.7897 |