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Cluster: HRGMv2_2909_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2909_2 HRGMv2_2909_2_164 165688 166641 + 3.A.1.5.11
TC HRGMv2_2909_2 HRGMv2_2909_2_165 166638 167528 + 3.A.1.5.27
TC HRGMv2_2909_2 HRGMv2_2909_2_166 167547 168554 + 3.A.1.5.35
TC HRGMv2_2909_2 HRGMv2_2909_2_167 168551 169519 + 3.A.1.5.20
sulfatase HRGMv2_2909_2 HRGMv2_2909_2_168 169615 171099 + S1_64
CAZyme HRGMv2_2909_2 HRGMv2_2909_2_169 171239 173500 - GH3
TF HRGMv2_2909_2 HRGMv2_2909_2_170 173659 174423 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_2909_2 HRGMv2_2909_2_171 174486 176777 + GH3
Gene ID: HRGMv2_2909_2_164
Type: TC
Location: 165688 - 166641 (+)
Gene ID: HRGMv2_2909_2_165
Type: TC
Location: 166638 - 167528 (+)
Gene ID: HRGMv2_2909_2_166
Type: TC
Location: 167547 - 168554 (+)
Gene ID: HRGMv2_2909_2_167
Type: TC
Location: 168551 - 169519 (+)
Gene ID: HRGMv2_2909_2_168
Type: sulfatase
Location: 169615 - 171099 (+)
Gene ID: HRGMv2_2909_2_169
Type: CAZyme
Location: 171239 - 173500 (-)
Gene ID: HRGMv2_2909_2_170
Type: TF
Location: 173659 - 174423 (+)
Gene ID: HRGMv2_2909_2_171
Type: CAZyme
Location: 174486 - 176777 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Gemmiger_A
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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