Cluster: HRGMv2_2909_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2909
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2909_2 | HRGMv2_2909_2_67 | 59390 | 60478 | + | GH177 |
| pfam | HRGMv2_2909_2 | HRGMv2_2909_2_68 | 60496 | 61230 | + | Formyl_trans_N |
| pfam | HRGMv2_2909_2 | HRGMv2_2909_2_69 | 61217 | 62347 | + | Aminotran_1_2 | Aminotran_5 | DegT_DnrJ_EryC1 |
| TC | HRGMv2_2909_2 | HRGMv2_2909_2_70 | 62363 | 63916 | + | 2.A.66.1.40 |
Gene ID: HRGMv2_2909_2_67
Type: CAZyme
Location: 59390 - 60478 (+)
Type: CAZyme
Location: 59390 - 60478 (+)
Gene ID: HRGMv2_2909_2_68
Type: pfam
Location: 60496 - 61230 (+)
Type: pfam
Location: 60496 - 61230 (+)
Gene ID: HRGMv2_2909_2_69
Type: pfam
Location: 61217 - 62347 (+)
Type: pfam
Location: 61217 - 62347 (+)
Gene ID: HRGMv2_2909_2_70
Type: TC
Location: 62363 - 63916 (+)
Type: TC
Location: 62363 - 63916 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.