Cluster: HRGMv2_2909_CGC33
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2909
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2909_21 | HRGMv2_2909_21_20 | 25250 | 26683 | - | 2.A.50.2.1 |
| pfam | HRGMv2_2909_21 | HRGMv2_2909_21_21 | 26740 | 27138 | - | DUF2304 |
| CAZyme | HRGMv2_2909_21 | HRGMv2_2909_21_22 | 27141 | 27860 | - | GT2 |
| CAZyme | HRGMv2_2909_21 | HRGMv2_2909_21_23 | 27857 | 29074 | - | GT4 |
Gene ID: HRGMv2_2909_21_20
Type: TC
Location: 25250 - 26683 (-)
Type: TC
Location: 25250 - 26683 (-)
Gene ID: HRGMv2_2909_21_21
Type: pfam
Location: 26740 - 27138 (-)
Type: pfam
Location: 26740 - 27138 (-)
Gene ID: HRGMv2_2909_21_22
Type: CAZyme
Location: 27141 - 27860 (-)
Type: CAZyme
Location: 27141 - 27860 (-)
Gene ID: HRGMv2_2909_21_23
Type: CAZyme
Location: 27857 - 29074 (-)
Type: CAZyme
Location: 27857 - 29074 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.