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Cluster: HRGMv2_2909_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2909_21 HRGMv2_2909_21_7 8960 10648 + 8.A.59.2.1
STP HRGMv2_2909_21 HRGMv2_2909_21_8 10838 12154 + SBP_bac_1
TC HRGMv2_2909_21 HRGMv2_2909_21_9 12220 13173 + 3.A.1.1.36
TC HRGMv2_2909_21 HRGMv2_2909_21_10 13170 13994 + 3.A.1.1.48
pfam HRGMv2_2909_21 HRGMv2_2909_21_11 14121 15278 + MFS_1 | MFS_1
CAZyme HRGMv2_2909_21 HRGMv2_2909_21_12 15315 16670 + GH1
CAZyme HRGMv2_2909_21 HRGMv2_2909_21_13 16683 19031 + GH3
pfam HRGMv2_2909_21 HRGMv2_2909_21_14 19070 20020 + IU_nuc_hydro
TC HRGMv2_2909_21 HRGMv2_2909_21_15 20301 21662 + 2.A.38.1.1
TC HRGMv2_2909_21 HRGMv2_2909_21_16 21681 23135 + 2.A.38.1.1
Gene ID: HRGMv2_2909_21_7
Type: TC
Location: 8960 - 10648 (+)
Gene ID: HRGMv2_2909_21_8
Type: STP
Location: 10838 - 12154 (+)
Gene ID: HRGMv2_2909_21_9
Type: TC
Location: 12220 - 13173 (+)
Gene ID: HRGMv2_2909_21_10
Type: TC
Location: 13170 - 13994 (+)
Gene ID: HRGMv2_2909_21_11
Type: pfam
Location: 14121 - 15278 (+)
Gene ID: HRGMv2_2909_21_12
Type: CAZyme
Location: 15315 - 16670 (+)
Gene ID: HRGMv2_2909_21_13
Type: CAZyme
Location: 16683 - 19031 (+)
Gene ID: HRGMv2_2909_21_14
Type: pfam
Location: 19070 - 20020 (+)
Gene ID: HRGMv2_2909_21_15
Type: TC
Location: 20301 - 21662 (+)
Gene ID: HRGMv2_2909_21_16
Type: TC
Location: 21681 - 23135 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Gemmiger_A
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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