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Cluster: HRGMv2_2909_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2909_17 HRGMv2_2909_17_57 59889 61085 + 2.A.86.1.8
CAZyme HRGMv2_2909_17 HRGMv2_2909_17_58 61128 61850 - GT51
NULL(UNKNOWN) HRGMv2_2909_17 HRGMv2_2909_17_59 62059 63360 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2909_17 HRGMv2_2909_17_60 63536 64846 + GH13_20
pfam HRGMv2_2909_17 HRGMv2_2909_17_61 64942 65205 - Thioredoxin_3
TC HRGMv2_2909_17 HRGMv2_2909_17_62 65228 67054 - 3.A.1.106.3
TC HRGMv2_2909_17 HRGMv2_2909_17_63 67051 68889 - 3.A.1.106.14
TC HRGMv2_2909_17 HRGMv2_2909_17_64 69257 70036 - 3.A.1.132.3
Gene ID: HRGMv2_2909_17_57
Type: TC
Location: 59889 - 61085 (+)
Gene ID: HRGMv2_2909_17_58
Type: CAZyme
Location: 61128 - 61850 (-)
Gene ID: HRGMv2_2909_17_59
Type:
Location: 62059 - 63360 (-)
Gene ID: HRGMv2_2909_17_60
Type: CAZyme
Location: 63536 - 64846 (+)
Gene ID: HRGMv2_2909_17_61
Type: pfam
Location: 64942 - 65205 (-)
Gene ID: HRGMv2_2909_17_62
Type: TC
Location: 65228 - 67054 (-)
Gene ID: HRGMv2_2909_17_63
Type: TC
Location: 67051 - 68889 (-)
Gene ID: HRGMv2_2909_17_64
Type: TC
Location: 69257 - 70036 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Gemmiger_A
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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