Cluster: HRGMv2_2909_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2909
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2909_8 | HRGMv2_2909_8_107 | 117621 | 118544 | + | 3.A.1.1.20 |
| TC | HRGMv2_2909_8 | HRGMv2_2909_8_108 | 118547 | 119389 | + | 3.A.1.1.23 |
| CAZyme | HRGMv2_2909_8 | HRGMv2_2909_8_109 | 119425 | 120369 | + | GH117 |
| CAZyme | HRGMv2_2909_8 | HRGMv2_2909_8_110 | 120373 | 121818 | + | GH13_18 |
Gene ID: HRGMv2_2909_8_107
Type: TC
Location: 117621 - 118544 (+)
Type: TC
Location: 117621 - 118544 (+)
Gene ID: HRGMv2_2909_8_108
Type: TC
Location: 118547 - 119389 (+)
Type: TC
Location: 118547 - 119389 (+)
Gene ID: HRGMv2_2909_8_109
Type: CAZyme
Location: 119425 - 120369 (+)
Type: CAZyme
Location: 119425 - 120369 (+)
Gene ID: HRGMv2_2909_8_110
Type: CAZyme
Location: 120373 - 121818 (+)
Type: CAZyme
Location: 120373 - 121818 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.