Cluster: HRGMv2_2909_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2909
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2909_2 | HRGMv2_2909_2_203 | 220705 | 222231 | + | GH77 |
| NULL(UNKNOWN) | HRGMv2_2909_2 | HRGMv2_2909_2_204 | 222298 | 222741 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2909_2 | HRGMv2_2909_2_205 | 222911 | 224296 | + | 2.A.66.1.37 |
| pfam | HRGMv2_2909_2 | HRGMv2_2909_2_206 | 224474 | 225403 | - | BcrAD_BadFG |
| STP | HRGMv2_2909_2 | HRGMv2_2909_2_207 | 225400 | 226470 | - | SIS | SIS |
| CAZyme | HRGMv2_2909_2 | HRGMv2_2909_2_208 | 226477 | 228069 | - | GH3 |
Gene ID: HRGMv2_2909_2_203
Type: CAZyme
Location: 220705 - 222231 (+)
Type: CAZyme
Location: 220705 - 222231 (+)
Gene ID: HRGMv2_2909_2_204
Type:
Location: 222298 - 222741 (+)
Type:
Location: 222298 - 222741 (+)
Gene ID: HRGMv2_2909_2_205
Type: TC
Location: 222911 - 224296 (+)
Type: TC
Location: 222911 - 224296 (+)
Gene ID: HRGMv2_2909_2_206
Type: pfam
Location: 224474 - 225403 (-)
Type: pfam
Location: 224474 - 225403 (-)
Gene ID: HRGMv2_2909_2_207
Type: STP
Location: 225400 - 226470 (-)
Type: STP
Location: 225400 - 226470 (-)
Gene ID: HRGMv2_2909_2_208
Type: CAZyme
Location: 226477 - 228069 (-)
Type: CAZyme
Location: 226477 - 228069 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.