Cluster: HRGMv2_2909_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2909
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2909_2 | HRGMv2_2909_2_190 | 199067 | 202771 | - | 3.A.1.137.2 |
| TC | HRGMv2_2909_2 | HRGMv2_2909_2_191 | 202778 | 203482 | - | 3.A.1.125.2 |
| CAZyme | HRGMv2_2909_2 | HRGMv2_2909_2_192 | 204072 | 209999 | + | GH2 |
| STP | HRGMv2_2909_2 | HRGMv2_2909_2_193 | 210166 | 210762 | + | TetR_N |
| pfam | HRGMv2_2909_2 | HRGMv2_2909_2_194 | 210857 | 211786 | - | DUF1848 |
| TC | HRGMv2_2909_2 | HRGMv2_2909_2_195 | 211828 | 212679 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_2909_2_190
Type: TC
Location: 199067 - 202771 (-)
Type: TC
Location: 199067 - 202771 (-)
Gene ID: HRGMv2_2909_2_191
Type: TC
Location: 202778 - 203482 (-)
Type: TC
Location: 202778 - 203482 (-)
Gene ID: HRGMv2_2909_2_192
Type: CAZyme
Location: 204072 - 209999 (+)
Type: CAZyme
Location: 204072 - 209999 (+)
Gene ID: HRGMv2_2909_2_193
Type: STP
Location: 210166 - 210762 (+)
Type: STP
Location: 210166 - 210762 (+)
Gene ID: HRGMv2_2909_2_194
Type: pfam
Location: 210857 - 211786 (-)
Type: pfam
Location: 210857 - 211786 (-)
Gene ID: HRGMv2_2909_2_195
Type: TC
Location: 211828 - 212679 (-)
Type: TC
Location: 211828 - 212679 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.