Cluster: HRGMv2_2893_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2893
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2893_3 | HRGMv2_2893_3_128 | 125853 | 126866 | + | 9.B.146.1.6 |
| TC | HRGMv2_2893_3 | HRGMv2_2893_3_129 | 126904 | 128058 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2893_3 | HRGMv2_2893_3_130 | 128084 | 129205 | + | GT28 |
Gene ID: HRGMv2_2893_3_128
Type: TC
Location: 125853 - 126866 (+)
Type: TC
Location: 125853 - 126866 (+)
Gene ID: HRGMv2_2893_3_129
Type: TC
Location: 126904 - 128058 (+)
Type: TC
Location: 126904 - 128058 (+)
Gene ID: HRGMv2_2893_3_130
Type: CAZyme
Location: 128084 - 129205 (+)
Type: CAZyme
Location: 128084 - 129205 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha sp900545405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2893_3_129 | vegetarian > vegan | 2.00937 | 0.00566 |
| HRGMv2_2893_3_130 | vegetarian > vegan | 1.43506 | 0.00566 |