Cluster: HRGMv2_2893_CGC18
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2893
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2893_26 | HRGMv2_2893_26_3 | 1518 | 2651 | - | GH24 |
| pfam | HRGMv2_2893_26 | HRGMv2_2893_26_4 | 2771 | 3409 | + | Lactamase_B_3 |
| TC | HRGMv2_2893_26 | HRGMv2_2893_26_5 | 3413 | 4066 | + | 1.A.62.2.1 |
Gene ID: HRGMv2_2893_26_3
Type: CAZyme
Location: 1518 - 2651 (-)
Type: CAZyme
Location: 1518 - 2651 (-)
Gene ID: HRGMv2_2893_26_4
Type: pfam
Location: 2771 - 3409 (+)
Type: pfam
Location: 2771 - 3409 (+)
Gene ID: HRGMv2_2893_26_5
Type: TC
Location: 3413 - 4066 (+)
Type: TC
Location: 3413 - 4066 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha sp900545405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2893_26_3 | vegetarian > vegan | 2.04584 | 0.00566 |
| HRGMv2_2893_26_5 | vegetarian > vegan | 2.42555 | 0.00566 |