Cluster: HRGMv2_2893_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2893
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2893_23 | HRGMv2_2893_23_9 | 11600 | 13924 | - | GH3 |
| peptidase | HRGMv2_2893_23 | HRGMv2_2893_23_10 | 13984 | 15570 | - | S11.004 |
| TC | HRGMv2_2893_23 | HRGMv2_2893_23_11 | 15688 | 16053 | + | 3.A.11.2.1 |
Gene ID: HRGMv2_2893_23_9
Type: CAZyme
Location: 11600 - 13924 (-)
Type: CAZyme
Location: 11600 - 13924 (-)
Gene ID: HRGMv2_2893_23_10
Type: peptidase
Location: 13984 - 15570 (-)
Type: peptidase
Location: 13984 - 15570 (-)
Gene ID: HRGMv2_2893_23_11
Type: TC
Location: 15688 - 16053 (+)
Type: TC
Location: 15688 - 16053 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha sp900545405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2893_23_9 | vegetarian > vegan | 1.42963 | 0.00566 |
| HRGMv2_2893_23_10 | vegetarian > vegan | 1.23289 | 0.00566 |
| HRGMv2_2893_23_11 | vegetarian > vegan | 1.28518 | 0.00566 |