Cluster: HRGMv2_2888_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2888
- CGC Family ID: CGCFAM_01305
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2888_34 | HRGMv2_2888_34_8 | 6084 | 7109 | - | 9.A.11.1.1 |
| NULL(UNKNOWN) | HRGMv2_2888_34 | HRGMv2_2888_34_9 | 7312 | 7761 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2888_34 | HRGMv2_2888_34_10 | 7758 | 9380 | + | 4.C.1.1.4 |
| pfam | HRGMv2_2888_34 | HRGMv2_2888_34_11 | 9409 | 10086 | + | AIM24 |
| TF | HRGMv2_2888_34 | HRGMv2_2888_34_12 | 10259 | 10708 | + | HTH_3 |
| CAZyme | HRGMv2_2888_34 | HRGMv2_2888_34_13 | 10796 | 12073 | + | GH18 |
Gene ID: HRGMv2_2888_34_8
Type: TC
Location: 6084 - 7109 (-)
Type: TC
Location: 6084 - 7109 (-)
Gene ID: HRGMv2_2888_34_9
Type:
Location: 7312 - 7761 (+)
Type:
Location: 7312 - 7761 (+)
Gene ID: HRGMv2_2888_34_10
Type: TC
Location: 7758 - 9380 (+)
Type: TC
Location: 7758 - 9380 (+)
Gene ID: HRGMv2_2888_34_11
Type: pfam
Location: 9409 - 10086 (+)
Type: pfam
Location: 9409 - 10086 (+)
Gene ID: HRGMv2_2888_34_12
Type: TF
Location: 10259 - 10708 (+)
Type: TF
Location: 10259 - 10708 (+)
Gene ID: HRGMv2_2888_34_13
Type: CAZyme
Location: 10796 - 12073 (+)
Type: CAZyme
Location: 10796 - 12073 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Evtepia
Species
Evtepia faecavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.