PROTEIN: HRGMv2_2888_34_9
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Protein File & Metadata
Source:
HRGMv2_2888_34_9.pdb
Genome ID:
Protein ID:
HRGMv2_2888_34_9
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Protein Sequence
MANATLMTQK VQEIHLINKL EKSGQVQLDS SFSLNVSFMA DGTRCVGKLQ QTLRDKEFAG 60 GKFTMTVVLV GIFSCTGATT DEVKRQIHGE VYDQLFPYMQ SECASLSAAS GIPGLMLRKV 120 PINPDNITVN KGGPGGDRNP DGGPKLTLL 149
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5FAB1-F1-model_v4 | 1 | 130 | 6 | 143 | 0.7156 |
0.8395 |
| AF-P0AG86-F1-model_v4 | 1 | 130 | 8 | 144 | 0.7072 |
0.8493 |
| AF-Q329P5-F1-model_v4 | 1 | 130 | 8 | 144 | 0.707 |
0.8491 |
| AF-Q7CPH8-F1-model_v4 | 1 | 130 | 8 | 144 | 0.7061 |
0.8482 |
| AF-A0A0H3H025-F1-model_v4 | 1 | 130 | 8 | 144 | 0.7056 |
0.8485 |
| AF-Q9HU56-F1-model_v4 | 1 | 139 | 14 | 163 | 0.7027 |
0.8132 |
| AF-Q57803-F1-model_v4 | 1 | 130 | 6 | 142 | 0.6854 |
0.8242 |
| AF-P44853-F1-model_v4 | 1 | 130 | 15 | 153 | 0.6804 |
0.8474 |
| AF-P95257-F1-model_v4 | 1 | 123 | 18 | 166 | 0.6231 |
0.8397 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1qyn-assembly1.cif.gz_C | 2 | 127 | 1 | 132 | 0.7507 |
0.864 |
| 1fx3-assembly1.cif.gz_D | 3 | 129 | 1 | 135 | 0.7441 |
0.8579 |
| 1ozb-assembly1.cif.gz_A | 2 | 130 | 1 | 138 | 0.7295 |
0.8532 |
| 1ozb-assembly2.cif.gz_G | 1 | 129 | 11 | 147 | 0.7203 |
0.8504 |
| 5mtw-assembly1.cif.gz_D | 1 | 120 | 9 | 136 | 0.6979 |
0.8516 |
| 5mtw-assembly1.cif.gz_C | 1 | 122 | 6 | 137 | 0.6929 |
0.8378 |
| 5jtp-assembly1.cif.gz_D | 1 | 127 | 8 | 141 | 0.6875 |
0.8453 |
| 5mtw-assembly1.cif.gz_B | 1 | 121 | 13 | 138 | 0.672 |
0.8204 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P57161-F1-model_v4 | 1 | 129 | 8 | 142 | 0.7351 |
0.8532 |
| AF-B8D8L1-F1-model_v4 | 1 | 129 | 8 | 142 | 0.7334 |
0.8519 |
| AF-B8D6W5-F1-model_v4 | 1 | 129 | 8 | 142 | 0.7332 |
0.8516 |
| AF-Q2GLM6-F1-model_v4 | 1 | 128 | 2 | 150 | 0.7197 |
0.8822 |
| AF-A9M1W7-F1-model_v4 | 1 | 130 | 6 | 143 | 0.7179 |
0.8416 |
| AF-B3PVT7-F1-model_v4 | 1 | 130 | 11 | 148 | 0.7157 |
0.8672 |
| AF-Q5FAB1-F1-model_v4 | 1 | 130 | 6 | 143 | 0.7156 |
0.8395 |
| AF-B4RQ47-F1-model_v4 | 1 | 130 | 6 | 143 | 0.7151 |
0.8391 |
| AF-Q31E80-F1-model_v4 | 1 | 130 | 7 | 143 | 0.7151 |
0.8441 |
| AF-Q1MNF1-F1-model_v4 | 1 | 130 | 12 | 149 | 0.7144 |
0.8679 |