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Cluster: HRGMv2_2886_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2886_11 HRGMv2_2886_11_37 35758 37164 + 2.A.66.1.28
TC HRGMv2_2886_11 HRGMv2_2886_11_38 37161 38906 + 3.A.1.106.3
pfam HRGMv2_2886_11 HRGMv2_2886_11_39 39047 40129 + APH
NULL(UNKNOWN) HRGMv2_2886_11 HRGMv2_2886_11_40 40140 41519 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2886_11 HRGMv2_2886_11_41 41879 43003 + CE9
pfam HRGMv2_2886_11 HRGMv2_2886_11_42 43528 44118 + APH
TF HRGMv2_2886_11 HRGMv2_2886_11_43 44272 44802 + HTH_3
TC HRGMv2_2886_11 HRGMv2_2886_11_44 45346 46281 + 3.A.1.5.20
TC HRGMv2_2886_11 HRGMv2_2886_11_45 46299 47168 + 3.A.1.5.3
TC HRGMv2_2886_11 HRGMv2_2886_11_46 47161 47961 + 3.A.1.5.12
TC HRGMv2_2886_11 HRGMv2_2886_11_47 47958 48932 + 3.A.1.5.20
TC HRGMv2_2886_11 HRGMv2_2886_11_48 48929 49633 + 3.A.1.5.33
Gene ID: HRGMv2_2886_11_37
Type: TC
Location: 35758 - 37164 (+)
Gene ID: HRGMv2_2886_11_38
Type: TC
Location: 37161 - 38906 (+)
Gene ID: HRGMv2_2886_11_39
Type: pfam
Location: 39047 - 40129 (+)
Gene ID: HRGMv2_2886_11_40
Type:
Location: 40140 - 41519 (+)
Gene ID: HRGMv2_2886_11_41
Type: CAZyme
Location: 41879 - 43003 (+)
Gene ID: HRGMv2_2886_11_42
Type: pfam
Location: 43528 - 44118 (+)
Gene ID: HRGMv2_2886_11_43
Type: TF
Location: 44272 - 44802 (+)
Gene ID: HRGMv2_2886_11_44
Type: TC
Location: 45346 - 46281 (+)
Gene ID: HRGMv2_2886_11_45
Type: TC
Location: 46299 - 47168 (+)
Gene ID: HRGMv2_2886_11_46
Type: TC
Location: 47161 - 47961 (+)
Gene ID: HRGMv2_2886_11_47
Type: TC
Location: 47958 - 48932 (+)
Gene ID: HRGMv2_2886_11_48
Type: TC
Location: 48929 - 49633 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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