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PROTEIN: HRGMv2_2886_11_40

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Protein File & Metadata
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Source:
HRGMv2_2886_11_40.pdb
Genome ID:
HRGMv2_2886
Protein ID:
HRGMv2_2886_11_40

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Detailed structural information will appear here after analysis...

Protein Sequence 
MNYLGIDYRI   GKLPPLDPDF   IPFGVWLDAY   EKGAQKPLAI   AIERDQGRIS   VHHTRIHGTP 60
ELAEADYRFV   ERYVKFLLWS   VGGWRITLCG   DSALATRLQS   AYTLRGERKF   DVQFMQDVYE 120
RPFEVIDCTE   AEFPKANEAS   VPIGGHMDGC   RIGFDAGGSD   RKVSAVIDGK   VVYSEEVVWH 180
PKTESDPQYH   FDGIVSAFRT   AASKMPRVDG   IGVSSAGVFI   GNSPMVSALF   IKVPREKREL 240
VKSIYDRAAL   EIGDVPIVVA   NDGDVTALAG   SMGLECGCVM   GMAMGTSEAV   GYVDRDRNVL 300
GWLNELAFAP   VDLFERAMAD   EWSTDIGVGC   KYFSQDAVIK   LAPRAGIDLD   PSLTPAEKLS 360
AVQALMAQGD   ARARTVFESI   GVYLAHTLPL   YCRFYDVRHL   IVLGRVMSGE   GGNVILDTCL 420
EVLREEYPAL   AQSVCVMLPD   EKTRRVGQSV   AAASLPVVK 459
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-I6Y8D3-F1-model_v4 149 459 1 302 0.7238 0.8828
AF-Q8ZLQ8-F1-model_v4 149 459 1 290 0.7037 0.8747
AF-P45425-F1-model_v4 149 459 1 290 0.7011 0.8721
AF-Q8DNV3-F1-model_v4 148 459 1 294 0.7008 0.8644
AF-Q32BB7-F1-model_v4 147 459 10 302 0.6954 0.8736
AF-K0F0J8-F1-model_v4 149 458 1 293 0.6895 0.8651
AF-Q8ZRE5-F1-model_v4 150 459 1 302 0.6875 0.8406
AF-P23917-F1-model_v4 150 459 1 302 0.6868 0.8398
AF-A0A0H3GKA4-F1-model_v4 150 459 1 302 0.6852 0.8406
AF-P44541-F1-model_v4 149 459 1 292 0.6819 0.8568
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A165R9S5 GH13_31 147 459 78 375 0.5946 0.8317
AF-A0A7L4W925-F1-model_v4 GH170 148 447 1 294 0.4967 0.8244
A0A497ZP30 GH1 148 459 295 617 0.4761 0.7885
AF-A0A346SND6-F1-model_v4 GH1 148 459 452 775 0.4395 0.7919
AF-M4W6Q6-F1-model_v4 GH1 148 459 452 774 0.4363 0.7856
AF-A0A5P9GJS8-F1-model_v4 GH1 148 459 452 776 0.435 0.783
AF-A0A222W361-F1-model_v4 GT2 148 459 366 654 0.4328 0.7776
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A165R9S5 GH13_31 147 459 78 375 0.5946 0.8317
A0A7L4W925 GH170 148 447 1 294 0.4967 0.8244
A0A497ZP30 GH1 148 459 295 617 0.4761 0.7885
A0A5P9GJS8 GH1 148 459 452 776 0.435 0.783
A0A222W361 GT2 148 459 366 654 0.4328 0.7776
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2aa4-assembly1.cif.gz_B 149 459 1 289 0.7086 0.8805
3vov-assembly1.cif.gz_C 148 459 1 289 0.694 0.8629
3vgk-assembly2.cif.gz_B 149 459 1 312 0.6917 0.8362
3vov-assembly1.cif.gz_D 149 459 1 295 0.689 0.8519
3vov-assembly1.cif.gz_B 148 459 1 298 0.688 0.8458
2qm1-assembly1.cif.gz_B 147 459 4 324 0.6865 0.8435
5nck-assembly1.cif.gz_B 149 459 1 289 0.6827 0.8525
6jdo-assembly1.cif.gz_A 149 459 1 293 0.6797 0.8412
7p9l-assembly1.cif.gz_BBB 148 457 3 306 0.6788 0.8312
4htl-assembly1.cif.gz_A 149 459 1 291 0.677 0.8399
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A1AGB6-F1-model_v4 149 459 1 291 0.7074 0.8764
AF-B7MBY4-F1-model_v4 149 459 1 291 0.7073 0.8764
AF-A8AQB2-F1-model_v4 149 458 1 288 0.7073 0.8831
AF-B7UJV5-F1-model_v4 149 459 1 291 0.7072 0.8762
AF-B2U1W2-F1-model_v4 149 459 1 291 0.7072 0.876
AF-B5YSU9-F1-model_v4 149 459 1 291 0.707 0.876
AF-B1LGI7-F1-model_v4 149 459 1 291 0.707 0.876
AF-B1IQQ7-F1-model_v4 149 459 1 291 0.7069 0.8759
AF-Q8FD60-F1-model_v4 149 459 1 291 0.7069 0.8759
AF-A8A532-F1-model_v4 149 459 1 291 0.7069 0.8759
Download Full SwissProt Results