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Cluster: HRGMv2_2882_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2882_13 HRGMv2_2882_13_2 502 2298 + 3.A.7.19.1
TF HRGMv2_2882_13 HRGMv2_2882_13_3 2480 3517 + LacI
CAZyme HRGMv2_2882_13 HRGMv2_2882_13_4 3526 5214 + CBM34 | GH13_20
TC HRGMv2_2882_13 HRGMv2_2882_13_5 5307 6617 + 3.A.1.1.22
TC HRGMv2_2882_13 HRGMv2_2882_13_6 6695 8005 + 3.A.1.1.6
TC HRGMv2_2882_13 HRGMv2_2882_13_7 8002 8874 + 3.A.1.1.6
CAZyme HRGMv2_2882_13 HRGMv2_2882_13_8 8876 10810 + GH31_15
CAZyme HRGMv2_2882_13 HRGMv2_2882_13_9 10853 13123 + CBM20 | GH13_2
Gene ID: HRGMv2_2882_13_2
Type: TC
Location: 502 - 2298 (+)
Gene ID: HRGMv2_2882_13_3
Type: TF
Location: 2480 - 3517 (+)
Gene ID: HRGMv2_2882_13_4
Type: CAZyme
Location: 3526 - 5214 (+)
Gene ID: HRGMv2_2882_13_5
Type: TC
Location: 5307 - 6617 (+)
Gene ID: HRGMv2_2882_13_6
Type: TC
Location: 6695 - 8005 (+)
Gene ID: HRGMv2_2882_13_7
Type: TC
Location: 8002 - 8874 (+)
Gene ID: HRGMv2_2882_13_8
Type: CAZyme
Location: 8876 - 10810 (+)
Gene ID: HRGMv2_2882_13_9
Type: CAZyme
Location: 10853 - 13123 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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