Cluster: HRGMv2_2882_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2882
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2882_53 | HRGMv2_2882_53_4 | 2975 | 4051 | + | 9.A.23.1.1 |
| NULL(UNKNOWN) | HRGMv2_2882_53 | HRGMv2_2882_53_5 | 4247 | 4645 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2882_53 | HRGMv2_2882_53_6 | 4694 | 5884 | - | Aminotran_1_2 |
| CAZyme | HRGMv2_2882_53 | HRGMv2_2882_53_7 | 6051 | 6833 | + | CE4 |
Gene ID: HRGMv2_2882_53_4
Type: TC
Location: 2975 - 4051 (+)
Type: TC
Location: 2975 - 4051 (+)
Gene ID: HRGMv2_2882_53_5
Type:
Location: 4247 - 4645 (+)
Type:
Location: 4247 - 4645 (+)
Gene ID: HRGMv2_2882_53_6
Type: STP
Location: 4694 - 5884 (-)
Type: STP
Location: 4694 - 5884 (-)
Gene ID: HRGMv2_2882_53_7
Type: CAZyme
Location: 6051 - 6833 (+)
Type: CAZyme
Location: 6051 - 6833 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha intestinigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2882_53_5 | vegetarian > vegan | 1.67656 | 0.00364 |
| HRGMv2_2882_53_6 | vegetarian > vegan | 1.60562 | 0.00364 |
| HRGMv2_2882_53_7 | vegetarian > vegan | 1.13931 | 0.00364 |