Cluster: HRGMv2_2882_CGC13
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2882
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2882_16 | HRGMv2_2882_16_1 | 73 | 1194 | - | GT28 |
| TC | HRGMv2_2882_16 | HRGMv2_2882_16_2 | 1220 | 2374 | - | 2.A.103.1.3 |
| TC | HRGMv2_2882_16 | HRGMv2_2882_16_3 | 2411 | 3424 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_2882_16_1
Type: CAZyme
Location: 73 - 1194 (-)
Type: CAZyme
Location: 73 - 1194 (-)
Gene ID: HRGMv2_2882_16_2
Type: TC
Location: 1220 - 2374 (-)
Type: TC
Location: 1220 - 2374 (-)
Gene ID: HRGMv2_2882_16_3
Type: TC
Location: 2411 - 3424 (-)
Type: TC
Location: 2411 - 3424 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha intestinigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2882_16_3 | vegetarian > omnivore | 1.39887 | 0.00050 |