Cluster: HRGMv2_2880_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2880
- CGC Family ID: CGCFAM_03404
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2880_23 | HRGMv2_2880_23_5 | 5955 | 7736 | - | 8.A.59.2.1 |
| TC | HRGMv2_2880_23 | HRGMv2_2880_23_6 | 8070 | 9434 | + | 3.A.1.1.40 |
| TC | HRGMv2_2880_23 | HRGMv2_2880_23_7 | 9575 | 10471 | + | 3.A.1.1.20 |
| TC | HRGMv2_2880_23 | HRGMv2_2880_23_8 | 10485 | 11345 | + | 3.A.1.1.11 |
| NULL(UNKNOWN) | HRGMv2_2880_23 | HRGMv2_2880_23_9 | 11444 | 12580 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2880_23 | HRGMv2_2880_23_10 | 12606 | 14624 | + | GH31_4 |
| CAZyme | HRGMv2_2880_23 | HRGMv2_2880_23_11 | 14685 | 15758 | + | GH179 |
Gene ID: HRGMv2_2880_23_5
Type: TC
Location: 5955 - 7736 (-)
Type: TC
Location: 5955 - 7736 (-)
Gene ID: HRGMv2_2880_23_6
Type: TC
Location: 8070 - 9434 (+)
Type: TC
Location: 8070 - 9434 (+)
Gene ID: HRGMv2_2880_23_7
Type: TC
Location: 9575 - 10471 (+)
Type: TC
Location: 9575 - 10471 (+)
Gene ID: HRGMv2_2880_23_8
Type: TC
Location: 10485 - 11345 (+)
Type: TC
Location: 10485 - 11345 (+)
Gene ID: HRGMv2_2880_23_9
Type:
Location: 11444 - 12580 (+)
Type:
Location: 11444 - 12580 (+)
Gene ID: HRGMv2_2880_23_10
Type: CAZyme
Location: 12606 - 14624 (+)
Type: CAZyme
Location: 12606 - 14624 (+)
Gene ID: HRGMv2_2880_23_11
Type: CAZyme
Location: 14685 - 15758 (+)
Type: CAZyme
Location: 14685 - 15758 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Acutalibacter
Species
Acutalibacter stercoravium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.