PROTEIN: HRGMv2_2880_23_9
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Protein File & Metadata
Source:
HRGMv2_2880_23_9.pdb
Genome ID:
Protein ID:
HRGMv2_2880_23_9
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Protein Sequence
METIQSALHE MTGLSKQLIR GCEKPACDGT VLYTPDGVGN YDALWVRDFG YMAEYCGDLM 60 GAPALEACLD FILTGQREDG WLPDRIEASG EPVYAAGAKG APVGEANLDN TPFFVFAAYS 120 YWMLCQERDR GHALEKVKSW IGPMARGLWC IPLSEEGLVY NDPAKPHSPY GFTDTVCKTG 180 RLYMESLLYW RACRQLAILA EAASAPKDLQ ADFSQRAQKI EIELCRLYGP DQGIFYAADG 240 LCRQPDIWGM AYMLAIGFPL EASVKAAVER WLTEHQPEYL YRGQVCHLPG GTWEKLLIDV 300 APGEYQNGAY WATASGWVWQ VLQRTDPEGA GRLLSELLED FREGGACECI NRGYRKLPQF 360 VVSATNIRGA LREWLGQS 378
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O60087-F1-model_v4 | 1 | 377 | 28 | 446 | 0.7132 |
0.7929 |
| AF-A0A133CZY8-F1-model_v4 | 2 | 378 | 17 | 427 | 0.712 |
0.777 |
| AF-A0A077Z6V3-F1-model_v4 | 1 | 378 | 90 | 512 | 0.6924 |
0.8114 |
| AF-K0F8U2-F1-model_v4 | 6 | 377 | 6 | 445 | 0.6895 |
0.7734 |
| AF-Q10211-F1-model_v4 | 4 | 377 | 254 | 642 | 0.6305 |
0.8117 |
| AF-Q59005-F1-model_v4 | 1 | 378 | 256 | 613 | 0.6299 |
0.828 |
| AF-K0EKF5-F1-model_v4 | 4 | 377 | 265 | 643 | 0.6115 |
0.7927 |
| AF-P42592-F1-model_v4 | 1 | 378 | 295 | 783 | 0.6038 |
0.8198 |
| AF-Q552D2-F1-model_v4 | 4 | 377 | 272 | 643 | 0.5993 |
0.7755 |
| AF-O01893-F1-model_v4 | 1 | 378 | 395 | 818 | 0.5954 |
0.8201 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5Q3LDV0-F1-model_v4 | GH0 | 1 | 378 | 9 | 429 | 0.788 |
0.856 |
| AF-A0A5B9QEW2-F1-model_v4 | GH0 | 1 | 377 | 11 | 425 | 0.7879 |
0.8555 |
| AF-A0A518DUA7-F1-model_v4 | GH0 | 1 | 378 | 11 | 432 | 0.7873 |
0.854 |
| AF-A0A3G8YHA6-F1-model_v4 | GH0 | 3 | 378 | 1 | 411 | 0.778 |
0.8467 |
| AF-A0A7G9YXR3-F1-model_v4 | GH15 | 6 | 375 | 3 | 362 | 0.7717 |
0.8125 |
| AF-A0A1X9YXR7-F1-model_v4 | GH63 | 6 | 378 | 1 | 424 | 0.7468 |
0.8173 |
| AF-A0A455T390-F1-model_v4 | GH0 | 1 | 376 | 3 | 427 | 0.7457 |
0.8142 |
| AF-A6W4H1-F1-model_v4 | GH15 | 2 | 374 | 60 | 402 | 0.7241 |
0.8361 |
| AF-A0A5C1WI26-F1-model_v4 | GH63 | 2 | 377 | 1 | 427 | 0.7223 |
0.7864 |
| AF-A0A1H2HDR2-F1-model_v4 | GH15 | 2 | 378 | 78 | 418 | 0.7206 |
0.8543 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7G9YXR3 | GH15 | 6 | 375 | 3 | 362 | 0.7717 |
0.8125 |
| A0A7M1ST39 | GH63 | 1 | 378 | 2 | 411 | 0.7714 |
0.8338 |
| D7E646 | GH15 | 3 | 377 | 1 | 408 | 0.7667 |
0.8208 |
| A0A2X3KJG7 | GH176 | 5 | 378 | 1 | 392 | 0.7547 |
0.8018 |
| A0A3S9WDT0 | GH175 | 1 | 378 | 7 | 426 | 0.7537 |
0.8175 |
| A0A7G6WRU8 | GH37 | 2 | 378 | 9 | 419 | 0.7526 |
0.8183 |
| A0A1X9YYU5 | GH63 | 6 | 378 | 1 | 426 | 0.7399 |
0.8211 |
| UIP59230.1 | GH37 | 1 | 378 | 1 | 405 | 0.7387 |
0.7949 |
| A0A2S0KV84 | GH63 | 6 | 377 | 2 | 410 | 0.7377 |
0.7985 |
| A0A1H7J2V5 | GH175 | 2 | 378 | 27 | 457 | 0.7286 |
0.8163 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5z73-assembly1.cif.gz_B | 6 | 378 | 1 | 422 | 0.7721 |
0.8458 |
| 5gop-assembly1.cif.gz_B-2 | 13 | 378 | 1 | 429 | 0.7635 |
0.8595 |
| 6ttj-assembly2.cif.gz_I | 9 | 378 | 1 | 427 | 0.7627 |
0.8483 |
| 6ttj-assembly1.cif.gz_L | 9 | 378 | 1 | 430 | 0.76 |
0.8479 |
| 6ttj-assembly1.cif.gz_C | 6 | 378 | 1 | 434 | 0.7593 |
0.844 |
| 5gop-assembly1.cif.gz_C-2 | 12 | 378 | 1 | 427 | 0.7586 |
0.8499 |
| 6ttj-assembly1.cif.gz_A | 6 | 378 | 1 | 427 | 0.7585 |
0.8374 |
| 6ttj-assembly1.cif.gz_K | 9 | 378 | 1 | 432 | 0.7584 |
0.8477 |
| 6ttj-assembly2.cif.gz_E | 9 | 378 | 1 | 431 | 0.7584 |
0.8466 |
| 6ttj-assembly1.cif.gz_D | 9 | 378 | 1 | 433 | 0.7579 |
0.8479 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D2PPM8-F1-model_v4 | 1 | 378 | 8 | 380 | 0.7401 |
0.7761 |
| AF-O60087-F1-model_v4 | 1 | 377 | 28 | 446 | 0.7132 |
0.7929 |
| AF-K5BDL0-F1-model_v4 | 6 | 377 | 7 | 446 | 0.6919 |
0.7762 |
| AF-D8T3S4-F1-model_v4 | 1 | 377 | 55 | 488 | 0.6905 |
0.7931 |
| AF-P94250-F1-model_v4 | 2 | 378 | 10 | 396 | 0.6899 |
0.784 |
| AF-D8QTR2-F1-model_v4 | 1 | 377 | 55 | 488 | 0.6855 |
0.7878 |
| AF-D8Q9M3-F1-model_v4 | 1 | 378 | 20 | 456 | 0.6501 |
0.794 |
| AF-Q4J9D4-F1-model_v4 | 4 | 378 | 203 | 576 | 0.6432 |
0.7932 |
| AF-Q10211-F1-model_v4 | 4 | 377 | 254 | 642 | 0.6305 |
0.8117 |
| AF-Q59005-F1-model_v4 | 1 | 378 | 256 | 613 | 0.6299 |
0.828 |