Cluster: HRGMv2_2871_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2871
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2871_66 | HRGMv2_2871_66_1 | 3 | 1451 | + | 3.A.3.6.10 |
| STP | HRGMv2_2871_66 | HRGMv2_2871_66_2 | 1660 | 4728 | - | EAL | GGDEF | GGDEF |
| pfam | HRGMv2_2871_66 | HRGMv2_2871_66_3 | 4832 | 5086 | - | DUF1905 |
| CAZyme | HRGMv2_2871_66 | HRGMv2_2871_66_4 | 5256 | 6389 | + | GT4 |
Gene ID: HRGMv2_2871_66_1
Type: TC
Location: 3 - 1451 (+)
Type: TC
Location: 3 - 1451 (+)
Gene ID: HRGMv2_2871_66_2
Type: STP
Location: 1660 - 4728 (-)
Type: STP
Location: 1660 - 4728 (-)
Gene ID: HRGMv2_2871_66_3
Type: pfam
Location: 4832 - 5086 (-)
Type: pfam
Location: 4832 - 5086 (-)
Gene ID: HRGMv2_2871_66_4
Type: CAZyme
Location: 5256 - 6389 (+)
Type: CAZyme
Location: 5256 - 6389 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1623
Species
UMGS1623 sp934647945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.