Cluster: HRGMv2_2866_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2866
- CGC Family ID: CGCFAM_10201
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2866_56 | HRGMv2_2866_56_10 | 8132 | 9268 | - | GH5_10 |
| TF | HRGMv2_2866_56 | HRGMv2_2866_56_11 | 9265 | 9657 | - | Fe_dep_repress |
| NULL(UNKNOWN) | HRGMv2_2866_56 | HRGMv2_2866_56_12 | 9777 | 10616 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2866_56 | HRGMv2_2866_56_13 | 10785 | 12140 | + | 2.A.66.1.33 |
| TC | HRGMv2_2866_56 | HRGMv2_2866_56_14 | 12272 | 14203 | + | 1.B.52.2.1 |
| CAZyme | HRGMv2_2866_56 | HRGMv2_2866_56_15 | 14254 | 15348 | - | CE2 |
Gene ID: HRGMv2_2866_56_10
Type: CAZyme
Location: 8132 - 9268 (-)
Type: CAZyme
Location: 8132 - 9268 (-)
Gene ID: HRGMv2_2866_56_11
Type: TF
Location: 9265 - 9657 (-)
Type: TF
Location: 9265 - 9657 (-)
Gene ID: HRGMv2_2866_56_12
Type:
Location: 9777 - 10616 (-)
Type:
Location: 9777 - 10616 (-)
Gene ID: HRGMv2_2866_56_13
Type: TC
Location: 10785 - 12140 (+)
Type: TC
Location: 10785 - 12140 (+)
Gene ID: HRGMv2_2866_56_14
Type: TC
Location: 12272 - 14203 (+)
Type: TC
Location: 12272 - 14203 (+)
Gene ID: HRGMv2_2866_56_15
Type: CAZyme
Location: 14254 - 15348 (-)
Type: CAZyme
Location: 14254 - 15348 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Huintestinicola
Species
Huintestinicola sp934486875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.