PROTEIN: HRGMv2_2866_56_12
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Protein File & Metadata
Source:
HRGMv2_2866_56_12.pdb
Genome ID:
Protein ID:
HRGMv2_2866_56_12
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Protein Sequence
MLLMIIVVAL FSITSLNDKY AVSKCKYTGS QLTFLMAAGT SVFLLLTLPF SDRTFTFSPI 60 SFLCIGLIAL SKYLEFFMSA KILLEMSVFE LKAWLGLTIF ISYFSDVLIY GESIELLKIV 120 CIIVTAVGLV LIAKEGRKQV HYGRIVLPLV LYLASNLIYG FTMKAAETHI SSTMALLFAL 180 IVLAIVMFPS ARPTSIPKES PEGTKGMLIT LGCKFPNALG LLCLNRIAAQ SLTNYAFVQP 240 MILIVMFVSD FFTKKEKTPV CSVIGGLLVI SGIFGFQAV 279
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HYN8-F1-model_v4 | 1 | 279 | 9 | 288 | 0.8277 |
0.8695 |
| AF-P71356-F1-model_v4 | 1 | 279 | 5 | 299 | 0.8231 |
0.8799 |
| AF-Q2G1P2-F1-model_v4 | 1 | 279 | 9 | 288 | 0.8206 |
0.8627 |
| AF-A0A0H3GK88-F1-model_v4 | 1 | 279 | 10 | 289 | 0.8133 |
0.8561 |
| AF-A0A0H3GNU2-F1-model_v4 | 1 | 279 | 11 | 283 | 0.8133 |
0.867 |
| AF-Q9I5Z7-F1-model_v4 | 1 | 278 | 4 | 276 | 0.8121 |
0.8528 |
| AF-Q5F951-F1-model_v4 | 1 | 279 | 1 | 282 | 0.811 |
0.8527 |
| AF-Q9I0D0-F1-model_v4 | 1 | 279 | 12 | 285 | 0.81 |
0.8597 |
| AF-P0ABT8-F1-model_v4 | 1 | 279 | 12 | 291 | 0.8077 |
0.8596 |
| AF-K0F5D2-F1-model_v4 | 1 | 279 | 13 | 291 | 0.8063 |
0.8707 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 279 | 381 | 665 | 0.5865 |
0.8425 |
| AF-A0A3P6AF83-F1-model_v4 | GH28 | 1 | 279 | 453 | 766 | 0.5731 |
0.8555 |
| AF-A0A7H8KSK8-F1-model_v4 | GT51 | 1 | 279 | 822 | 1110 | 0.505 |
0.8175 |
| AF-A0A4D6KI88-F1-model_v4 | GH1 | 1 | 279 | 100 | 392 | 0.5025 |
0.7873 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 279 | 381 | 665 | 0.5865 |
0.8425 |
| A0A3P6AF83 | GH28 | 1 | 279 | 453 | 766 | 0.5731 |
0.8555 |
| A0A7H8KSK8 | GT51 | 1 | 279 | 822 | 1110 | 0.505 |
0.8175 |
| A0A4D6KI88 | GH1 | 1 | 279 | 100 | 392 | 0.5025 |
0.7873 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7b0k-assembly1.cif.gz_A | 1 | 278 | 2 | 255 | 0.8023 |
0.8667 |
| 7paf-assembly1.cif.gz_D | 1 | 277 | 2 | 278 | 0.7916 |
0.8246 |
| 5ogk-assembly1.cif.gz_B | 1 | 279 | 4 | 291 | 0.7839 |
0.8341 |
| 5i20-assembly4.cif.gz_D | 1 | 279 | 6 | 280 | 0.7821 |
0.8247 |
| 5ogk-assembly2.cif.gz_C | 1 | 279 | 5 | 288 | 0.7779 |
0.8245 |
| 5ogk-assembly1.cif.gz_A | 1 | 279 | 4 | 286 | 0.7778 |
0.8222 |
| 6qsk-assembly2.cif.gz_G-2 | 1 | 279 | 5 | 290 | 0.7759 |
0.8254 |
| 5i20-assembly3.cif.gz_C | 1 | 279 | 6 | 279 | 0.7744 |
0.8208 |
| 5oge-assembly3.cif.gz_H-2 | 1 | 279 | 7 | 293 | 0.7742 |
0.8275 |
| 6qsk-assembly1.cif.gz_A | 1 | 279 | 4 | 286 | 0.774 |
0.8188 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71356-F1-model_v4 | 1 | 279 | 5 | 299 | 0.8231 |
0.8799 |
| AF-O34416-F1-model_v4 | 1 | 279 | 5 | 286 | 0.8208 |
0.8637 |
| AF-F8JJ22-F1-model_v4 | 1 | 279 | 7 | 283 | 0.818 |
0.8732 |
| AF-O29740-F1-model_v4 | 1 | 279 | 6 | 286 | 0.8144 |
0.8536 |
| AF-P0ABT8-F1-model_v4 | 1 | 279 | 12 | 291 | 0.8077 |
0.8596 |
| AF-P0ABT9-F1-model_v4 | 1 | 279 | 12 | 291 | 0.8067 |
0.8588 |
| AF-Q09875-F1-model_v4 | 1 | 279 | 1 | 318 | 0.8062 |
0.8858 |
| AF-P44170-F1-model_v4 | 1 | 279 | 1 | 287 | 0.8037 |
0.845 |
| AF-O32256-F1-model_v4 | 1 | 279 | 10 | 288 | 0.8029 |
0.8617 |
| AF-P96680-F1-model_v4 | 1 | 279 | 9 | 286 | 0.7993 |
0.8626 |