Cluster: HRGMv2_2863_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2863
- CGC Family ID: CGCFAM_00050
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2863_2 | HRGMv2_2863_2_92 | 89480 | 90238 | + | 8.A.3.2.3 |
| TC | HRGMv2_2863_2 | HRGMv2_2863_2_93 | 90261 | 91784 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_2863_2 | HRGMv2_2863_2_94 | 91784 | 92914 | + | GT4 |
| CAZyme | HRGMv2_2863_2 | HRGMv2_2863_2_95 | 92911 | 94110 | + | GT4 |
| pfam | HRGMv2_2863_2 | HRGMv2_2863_2_96 | 94126 | 95295 | + | Radical_SAM | SPASM |
| NULL(UNKNOWN) | HRGMv2_2863_2 | HRGMv2_2863_2_97 | 95324 | 96571 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2863_2 | HRGMv2_2863_2_98 | 96596 | 97693 | + | GT4 |
Gene ID: HRGMv2_2863_2_92
Type: TC
Location: 89480 - 90238 (+)
Type: TC
Location: 89480 - 90238 (+)
Gene ID: HRGMv2_2863_2_93
Type: TC
Location: 90261 - 91784 (+)
Type: TC
Location: 90261 - 91784 (+)
Gene ID: HRGMv2_2863_2_94
Type: CAZyme
Location: 91784 - 92914 (+)
Type: CAZyme
Location: 91784 - 92914 (+)
Gene ID: HRGMv2_2863_2_95
Type: CAZyme
Location: 92911 - 94110 (+)
Type: CAZyme
Location: 92911 - 94110 (+)
Gene ID: HRGMv2_2863_2_96
Type: pfam
Location: 94126 - 95295 (+)
Type: pfam
Location: 94126 - 95295 (+)
Gene ID: HRGMv2_2863_2_97
Type:
Location: 95324 - 96571 (+)
Type:
Location: 95324 - 96571 (+)
Gene ID: HRGMv2_2863_2_98
Type: CAZyme
Location: 96596 - 97693 (+)
Type: CAZyme
Location: 96596 - 97693 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R coprostanoligenes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.