PROTEIN: HRGMv2_2863_2_97
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Protein File & Metadata
Source:
HRGMv2_2863_2_97.pdb
Genome ID:
Protein ID:
HRGMv2_2863_2_97
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Protein Sequence
MKLTLRKIDI FKYLFLYLIF QPTLPSLIKN EIISTFFNYT DEMIGVALVI IVLFKALKSE 60 ITLLKFERYM LIFMFIFEVI GIISGLIYKY QDTQYMLVDA YTCAKFFVFY LCARLLTQNK 120 LTHEYFFSIN GICKALAVIF FALSLHDAFL SPWFNIGDYR YFTYSVALFF EHPEFLARAS 180 MTIIFLLAYN YKYYKRNIYY ILMLTVVMFL TFRTKAIVSI FVLFAVYLYF IKFRFKSLAP 240 IGVITIAGAT YFGYDSLSKY YIALDKAARR VLTNDSITIA NQLFPIGSGF GSFGSSMAAQ 300 YYSRLYYKLG YNQMDGIGLG EGKKGMYLSD TFWPIIIAQT GWIGLISFSL ALLSMLSYII 360 KSRKNDVYYF WVAISIIAQD LISSFAAPAF FYPSAMAPFL FLGLITSIHE FPKKQ 415
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O25682-F1-model_v4 | 2 | 415 | 5 | 429 | 0.6679 |
0.7042 |
| AF-Q9HUG6-F1-model_v4 | 4 | 414 | 16 | 390 | 0.6644 |
0.7428 |
| AF-P44067-F1-model_v4 | 4 | 407 | 6 | 399 | 0.6629 |
0.7065 |
| AF-P26471-F1-model_v4 | 4 | 412 | 13 | 404 | 0.6498 |
0.7004 |
| AF-Q8CYC1-F1-model_v4 | 1 | 415 | 7 | 395 | 0.6486 |
0.7 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-Q4JZZ9-F1-model_v4 | GT4 | 1 | 412 | 2 | 406 | 0.6706 |
0.7053 |
| AF-A0A212QE91-F1-model_v4 | GT2 | 2 | 415 | 1 | 408 | 0.5933 |
0.7517 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 2 | 415 | 1 | 408 | 0.5883 |
0.7456 |
| AF-E4PMS8-F1-model_v4 | GT2 | 2 | 415 | 1 | 410 | 0.5868 |
0.7405 |
| AF-M1FGR5-F1-model_v4 | GT2 | 4 | 415 | 4 | 411 | 0.5862 |
0.7442 |
| AF-A0A1D9GRK7-F1-model_v4 | GT2 | 5 | 415 | 1 | 405 | 0.5827 |
0.7411 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 3 | 415 | 3 | 409 | 0.5814 |
0.7373 |
| AF-A0A346S464-F1-model_v4 | GT2 | 2 | 415 | 1 | 410 | 0.5811 |
0.7338 |
| QSP96058.1 | GT2 | 3 | 415 | 9 | 416 | 0.5753 |
0.7307 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 4 | 415 | 6 | 412 | 0.5707 |
0.7255 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q4JZZ9 | GT4 | 1 | 412 | 2 | 406 | 0.6706 |
0.7053 |
| QSP96058.1 | GT2 | 3 | 415 | 9 | 416 | 0.5753 |
0.7307 |
| A0A9Q9IL13 | GT4 | 4 | 414 | 17 | 500 | 0.564 |
0.7926 |
| A0A517MXC4 | GT26 | 2 | 414 | 14 | 447 | 0.5565 |
0.7266 |
| B5YD26 | GT9 | 4 | 415 | 40 | 547 | 0.5538 |
0.7335 |
| WBY01952.1 | GT9 | 4 | 414 | 14 | 410 | 0.542 |
0.7379 |
| D5MJ04 | GT9 | 4 | 415 | 23 | 544 | 0.5378 |
0.7102 |
| H8L3P3 | GT2 | 1 | 414 | 9 | 663 | 0.532 |
0.6909 |
| A0A2P1NHY6 | GT4 | 1 | 415 | 21 | 444 | 0.531 |
0.7139 |
| K2DNF3 | GT83 | 5 | 412 | 20 | 446 | 0.53 |
0.7538 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37784-F1-model_v4 | 4 | 414 | 2 | 375 | 0.6815 |
0.746 |
| AF-Q9HUG6-F1-model_v4 | 4 | 414 | 16 | 390 | 0.6644 |
0.7428 |
| AF-P44067-F1-model_v4 | 4 | 407 | 6 | 399 | 0.6629 |
0.7065 |
| AF-Q00474-F1-model_v4 | 31 | 409 | 1 | 391 | 0.6546 |
0.7207 |
| AF-P26471-F1-model_v4 | 4 | 412 | 13 | 404 | 0.6498 |
0.7004 |
| AF-Q6F7F9-F1-model_v4 | 1 | 411 | 3 | 403 | 0.6062 |
0.7251 |