Cluster: HRGMv2_2853_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2853
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2853_7 | HRGMv2_2853_7_41 | 45960 | 46646 | + | 3.A.1.125.3 |
| pfam | HRGMv2_2853_7 | HRGMv2_2853_7_42 | 46646 | 49363 | + | FtsX | FtsX | MacB_PCD |
| NULL(UNKNOWN) | HRGMv2_2853_7 | HRGMv2_2853_7_43 | 49363 | 50307 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2853_7 | HRGMv2_2853_7_44 | 50459 | 51838 | + | 2.A.25.1.5 |
| NULL(UNKNOWN) | HRGMv2_2853_7 | HRGMv2_2853_7_45 | 51968 | 52414 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2853_7 | HRGMv2_2853_7_46 | 52380 | 53666 | + | GH136 |
| CAZyme | HRGMv2_2853_7 | HRGMv2_2853_7_47 | 53688 | 55883 | + | GH112 |
Gene ID: HRGMv2_2853_7_41
Type: TC
Location: 45960 - 46646 (+)
Type: TC
Location: 45960 - 46646 (+)
Gene ID: HRGMv2_2853_7_42
Type: pfam
Location: 46646 - 49363 (+)
Type: pfam
Location: 46646 - 49363 (+)
Gene ID: HRGMv2_2853_7_43
Type:
Location: 49363 - 50307 (+)
Type:
Location: 49363 - 50307 (+)
Gene ID: HRGMv2_2853_7_44
Type: TC
Location: 50459 - 51838 (+)
Type: TC
Location: 50459 - 51838 (+)
Gene ID: HRGMv2_2853_7_45
Type:
Location: 51968 - 52414 (+)
Type:
Location: 51968 - 52414 (+)
Gene ID: HRGMv2_2853_7_46
Type: CAZyme
Location: 52380 - 53666 (+)
Type: CAZyme
Location: 52380 - 53666 (+)
Gene ID: HRGMv2_2853_7_47
Type: CAZyme
Location: 53688 - 55883 (+)
Type: CAZyme
Location: 53688 - 55883 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp900539165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.