PROTEIN: HRGMv2_2853_7_43
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Protein File & Metadata
Source:
HRGMv2_2853_7_43.pdb
Genome ID:
Protein ID:
HRGMv2_2853_7_43
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Protein Sequence
MKKILSLLVS ILLCVCMLVP CATAFAEEDE AQTPVNSSVP RLMLTSYSVE GGYASPSEQK 60 ELSLTVKNYS RDKAIYNVKL SLTDDSAEIQ PDGTGTAFVQ KINAGASYTW KLKIGASATA 120 SVGNHKLTVS SEYEDEYHSA FSNSDTVIVK VKQKTELSYD GIVLASRLTQ DSSSSMNAVL 180 MNTGKSVIKN AKVSLDVEGV TTGGVLFIGE VPVGESKSGT INFMVDSSAE GEIKGTATIT 240 YENDFGEEFS QTVELTSNVE PKKEETEQEQ EKQPKFRLWW AFMLGGLVIG GAVGAIIPIS 300 INSYKRRKED ELRL 314
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58901-F1-model_v4 | 22 | 276 | 128 | 415 | 0.5442 |
0.7765 |
| AF-P35330-F1-model_v4 | 35 | 275 | 18 | 234 | 0.5414 |
0.7362 |
| AF-Q58956-F1-model_v4 | 21 | 278 | 84 | 456 | 0.4617 |
0.705 |
| AF-Q58205-F1-model_v4 | 6 | 296 | 10 | 340 | 0.4463 |
0.5966 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2S9HPB9 | CBM13 | 1 | 308 | 104 | 815 | 0.4244 |
0.6307 |
| A0A0X1T6N5 | CBM5 | 14 | 281 | 106 | 715 | 0.4054 |
0.6571 |
| A0A829R9Y8 | CBM6 | 14 | 291 | 6 | 384 | 0.3792 |
0.5869 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7ptb-assembly1.cif.gz_A | 42 | 261 | 1 | 304 | 0.4724 |
0.6678 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58901-F1-model_v4 | 22 | 276 | 128 | 415 | 0.5442 |
0.7765 |
| AF-P35330-F1-model_v4 | 35 | 275 | 18 | 234 | 0.5414 |
0.7362 |
| AF-Q7TSN7-F1-model_v4 | 29 | 310 | 10 | 325 | 0.4793 |
0.5869 |
| AF-Q58956-F1-model_v4 | 21 | 278 | 84 | 456 | 0.4617 |
0.705 |
| AF-Q58205-F1-model_v4 | 6 | 296 | 10 | 340 | 0.4463 |
0.5966 |
| AF-P29579-F1-model_v4 | 38 | 261 | 20 | 261 | 0.4434 |
0.7421 |
| AF-Q9AIS7-F1-model_v4 | 23 | 278 | 174 | 537 | 0.403 |
0.6177 |
| AF-Q253E5-F1-model_v4 | 13 | 260 | 268 | 558 | 0.3988 |
0.6259 |
| AF-P23700-F1-model_v4 | 13 | 260 | 266 | 556 | 0.3968 |
0.6215 |
| AF-F0T377-F1-model_v4 | 13 | 260 | 267 | 557 | 0.3932 |
0.6167 |