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Cluster: HRGMv2_2845_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2845_6 HRGMv2_2845_6_39 48775 50613 - 3.A.1.106.3
TC HRGMv2_2845_6 HRGMv2_2845_6_40 50600 52450 - 3.A.1.106.14
TC HRGMv2_2845_6 HRGMv2_2845_6_41 52677 53321 - 1.A.62.2.1
pfam HRGMv2_2845_6 HRGMv2_2845_6_42 53325 53963 - Lactamase_B_3
CAZyme HRGMv2_2845_6 HRGMv2_2845_6_43 54087 55211 + GH24
STP HRGMv2_2845_6 HRGMv2_2845_6_44 55281 55838 + TetR_N
pfam HRGMv2_2845_6 HRGMv2_2845_6_45 55981 57330 + Radical_SAM
TC HRGMv2_2845_6 HRGMv2_2845_6_46 57449 59089 + 2.A.66.2.14
Gene ID: HRGMv2_2845_6_39
Type: TC
Location: 48775 - 50613 (-)
Gene ID: HRGMv2_2845_6_40
Type: TC
Location: 50600 - 52450 (-)
Gene ID: HRGMv2_2845_6_41
Type: TC
Location: 52677 - 53321 (-)
Gene ID: HRGMv2_2845_6_42
Type: pfam
Location: 53325 - 53963 (-)
Gene ID: HRGMv2_2845_6_43
Type: CAZyme
Location: 54087 - 55211 (+)
Gene ID: HRGMv2_2845_6_44
Type: STP
Location: 55281 - 55838 (+)
Gene ID: HRGMv2_2845_6_45
Type: pfam
Location: 55981 - 57330 (+)
Gene ID: HRGMv2_2845_6_46
Type: TC
Location: 57449 - 59089 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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