Cluster: HRGMv2_2845_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2845
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2845_5 | HRGMv2_2845_5_110 | 116250 | 118124 | + | 3.A.3.6.16 |
| pfam | HRGMv2_2845_5 | HRGMv2_2845_5_111 | 118241 | 119629 | + | AMMECR1 | LigB |
| pfam | HRGMv2_2845_5 | HRGMv2_2845_5_112 | 119626 | 120450 | + | Radical_SAM |
| CAZyme | HRGMv2_2845_5 | HRGMv2_2845_5_113 | 120795 | 122834 | + | GT5 |
Gene ID: HRGMv2_2845_5_110
Type: TC
Location: 116250 - 118124 (+)
Type: TC
Location: 116250 - 118124 (+)
Gene ID: HRGMv2_2845_5_111
Type: pfam
Location: 118241 - 119629 (+)
Type: pfam
Location: 118241 - 119629 (+)
Gene ID: HRGMv2_2845_5_112
Type: pfam
Location: 119626 - 120450 (+)
Type: pfam
Location: 119626 - 120450 (+)
Gene ID: HRGMv2_2845_5_113
Type: CAZyme
Location: 120795 - 122834 (+)
Type: CAZyme
Location: 120795 - 122834 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2845_5_110 | vegetarian > vegan | 1.22147 | 0.00701 |