Cluster: HRGMv2_2845_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2845
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2845_35 | HRGMv2_2845_35_9 | 12373 | 13065 | - | 9.B.20.1.4 |
| pfam | HRGMv2_2845_35 | HRGMv2_2845_35_10 | 13099 | 13365 | - | NAGPA |
| NULL(UNKNOWN) | HRGMv2_2845_35 | HRGMv2_2845_35_11 | 13460 | 14572 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2845_35 | HRGMv2_2845_35_12 | 14984 | 16861 | - | CBM32 |
| TC | HRGMv2_2845_35 | HRGMv2_2845_35_13 | 16873 | 17985 | - | 3.A.1.1.22 |
Gene ID: HRGMv2_2845_35_9
Type: TC
Location: 12373 - 13065 (-)
Type: TC
Location: 12373 - 13065 (-)
Gene ID: HRGMv2_2845_35_10
Type: pfam
Location: 13099 - 13365 (-)
Type: pfam
Location: 13099 - 13365 (-)
Gene ID: HRGMv2_2845_35_11
Type:
Location: 13460 - 14572 (-)
Type:
Location: 13460 - 14572 (-)
Gene ID: HRGMv2_2845_35_12
Type: CAZyme
Location: 14984 - 16861 (-)
Type: CAZyme
Location: 14984 - 16861 (-)
Gene ID: HRGMv2_2845_35_13
Type: TC
Location: 16873 - 17985 (-)
Type: TC
Location: 16873 - 17985 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.