Cluster: HRGMv2_2845_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2845
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2845_27 | HRGMv2_2845_27_18 | 17949 | 18962 | + | 9.B.146.1.6 |
| TC | HRGMv2_2845_27 | HRGMv2_2845_27_19 | 18996 | 20147 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2845_27 | HRGMv2_2845_27_20 | 20164 | 21288 | + | GT28 |
Gene ID: HRGMv2_2845_27_18
Type: TC
Location: 17949 - 18962 (+)
Type: TC
Location: 17949 - 18962 (+)
Gene ID: HRGMv2_2845_27_19
Type: TC
Location: 18996 - 20147 (+)
Type: TC
Location: 18996 - 20147 (+)
Gene ID: HRGMv2_2845_27_20
Type: CAZyme
Location: 20164 - 21288 (+)
Type: CAZyme
Location: 20164 - 21288 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2845_27_19 | vegetarian > vegan | 1.55879 | 0.00701 |