Cluster: HRGMv2_2845_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2845
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2845_21 | HRGMv2_2845_21_47 | 41087 | 42805 | - | CBM34 | GH13_20 |
| TC | HRGMv2_2845_21 | HRGMv2_2845_21_48 | 42807 | 43652 | - | 3.A.1.1.6 |
| TC | HRGMv2_2845_21 | HRGMv2_2845_21_49 | 43649 | 44557 | - | 3.A.1.1.22 |
| TC | HRGMv2_2845_21 | HRGMv2_2845_21_50 | 44554 | 45753 | - | 3.A.1.1.16 |
Gene ID: HRGMv2_2845_21_47
Type: CAZyme
Location: 41087 - 42805 (-)
Type: CAZyme
Location: 41087 - 42805 (-)
Gene ID: HRGMv2_2845_21_48
Type: TC
Location: 42807 - 43652 (-)
Type: TC
Location: 42807 - 43652 (-)
Gene ID: HRGMv2_2845_21_49
Type: TC
Location: 43649 - 44557 (-)
Type: TC
Location: 43649 - 44557 (-)
Gene ID: HRGMv2_2845_21_50
Type: TC
Location: 44554 - 45753 (-)
Type: TC
Location: 44554 - 45753 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2845_21_47 | vegetarian > vegan | 1.03401 | 0.00701 |
| HRGMv2_2845_21_48 | vegetarian > vegan | 2.14373 | 0.00701 |
| HRGMv2_2845_21_50 | vegetarian > vegan | 1.59960 | 0.00701 |