Cluster: HRGMv2_2845_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2845
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2845_13 | HRGMv2_2845_13_4 | 2158 | 2940 | - | CE4 |
| STP | HRGMv2_2845_13 | HRGMv2_2845_13_5 | 3096 | 4286 | + | Aminotran_1_2 |
| NULL(UNKNOWN) | HRGMv2_2845_13 | HRGMv2_2845_13_6 | 4352 | 4756 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2845_13 | HRGMv2_2845_13_7 | 4941 | 6014 | - | 9.A.23.1.1 |
Gene ID: HRGMv2_2845_13_4
Type: CAZyme
Location: 2158 - 2940 (-)
Type: CAZyme
Location: 2158 - 2940 (-)
Gene ID: HRGMv2_2845_13_5
Type: STP
Location: 3096 - 4286 (+)
Type: STP
Location: 3096 - 4286 (+)
Gene ID: HRGMv2_2845_13_6
Type:
Location: 4352 - 4756 (-)
Type:
Location: 4352 - 4756 (-)
Gene ID: HRGMv2_2845_13_7
Type: TC
Location: 4941 - 6014 (-)
Type: TC
Location: 4941 - 6014 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Scatomorpha
Species
Scatomorpha merdavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2845_13_5 | vegetarian > vegan | 1.05908 | 0.00701 |