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Cluster: HRGMv2_2825_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2825_11 HRGMv2_2825_11_2 1770 2651 + 3.A.1.3.20
TC HRGMv2_2825_11 HRGMv2_2825_11_3 2679 3443 + 3.A.1.3.20
TC HRGMv2_2825_11 HRGMv2_2825_11_4 3447 4187 + 3.A.1.3.20
pfam HRGMv2_2825_11 HRGMv2_2825_11_5 4423 5076 - G3P_acyltransf
CAZyme HRGMv2_2825_11 HRGMv2_2825_11_6 5069 6178 - GT28
STP HRGMv2_2825_11 HRGMv2_2825_11_7 6226 6702 - HD
CAZyme HRGMv2_2825_11 HRGMv2_2825_11_8 7098 8222 + GH27
pfam HRGMv2_2825_11 HRGMv2_2825_11_9 8385 8702 + Thioredoxin | Thioredoxin_2
TC HRGMv2_2825_11 HRGMv2_2825_11_10 8828 9535 + 3.A.1.15.4
Gene ID: HRGMv2_2825_11_2
Type: TC
Location: 1770 - 2651 (+)
Gene ID: HRGMv2_2825_11_3
Type: TC
Location: 2679 - 3443 (+)
Gene ID: HRGMv2_2825_11_4
Type: TC
Location: 3447 - 4187 (+)
Gene ID: HRGMv2_2825_11_5
Type: pfam
Location: 4423 - 5076 (-)
Gene ID: HRGMv2_2825_11_6
Type: CAZyme
Location: 5069 - 6178 (-)
Gene ID: HRGMv2_2825_11_7
Type: STP
Location: 6226 - 6702 (-)
Gene ID: HRGMv2_2825_11_8
Type: CAZyme
Location: 7098 - 8222 (+)
Gene ID: HRGMv2_2825_11_9
Type: pfam
Location: 8385 - 8702 (+)
Gene ID: HRGMv2_2825_11_10
Type: TC
Location: 8828 - 9535 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS1312
→
Species
UMGS1312 sp900550625

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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