dbCAN Logo

Cluster: HRGMv2_2825_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2825_9 HRGMv2_2825_9_8 9167 10459 - 9.A.40.1.2
TC HRGMv2_2825_9 HRGMv2_2825_9_9 10871 11395 - 9.A.11.1.1
pfam HRGMv2_2825_9 HRGMv2_2825_9_10 11521 11940 + Zn_Ribbon_1
peptidase HRGMv2_2825_9 HRGMv2_2825_9_11 12002 13060 - G04.UNW
TC HRGMv2_2825_9 HRGMv2_2825_9_12 13454 14257 + 1.A.23.2.1
STP HRGMv2_2825_9 HRGMv2_2825_9_13 14285 15559 - AAA
NULL(UNKNOWN) HRGMv2_2825_9 HRGMv2_2825_9_14 15683 16015 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2825_9 HRGMv2_2825_9_15 16525 18672 + GH3
Gene ID: HRGMv2_2825_9_8
Type: TC
Location: 9167 - 10459 (-)
Gene ID: HRGMv2_2825_9_9
Type: TC
Location: 10871 - 11395 (-)
Gene ID: HRGMv2_2825_9_10
Type: pfam
Location: 11521 - 11940 (+)
Gene ID: HRGMv2_2825_9_11
Type: peptidase
Location: 12002 - 13060 (-)
Gene ID: HRGMv2_2825_9_12
Type: TC
Location: 13454 - 14257 (+)
Gene ID: HRGMv2_2825_9_13
Type: STP
Location: 14285 - 15559 (-)
Gene ID: HRGMv2_2825_9_14
Type:
Location: 15683 - 16015 (+)
Gene ID: HRGMv2_2825_9_15
Type: CAZyme
Location: 16525 - 18672 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS1312
→
Species
UMGS1312 sp900550625

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List