Cluster: HRGMv2_2825_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2825
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2825_7 | HRGMv2_2825_7_172 | 185087 | 186322 | - | GH29 |
| pfam | HRGMv2_2825_7 | HRGMv2_2825_7_173 | 186491 | 187162 | + | RadC |
| pfam | HRGMv2_2825_7 | HRGMv2_2825_7_174 | 187181 | 187636 | + | DUF386 |
| CAZyme | HRGMv2_2825_7 | HRGMv2_2825_7_175 | 187644 | 189407 | + | GH36 |
| TC | HRGMv2_2825_7 | HRGMv2_2825_7_176 | 189425 | 190597 | + | 9.B.10.1.1 |
| pfam | HRGMv2_2825_7 | HRGMv2_2825_7_177 | 190601 | 191551 | + | DUF1980_C |
| TC | HRGMv2_2825_7 | HRGMv2_2825_7_178 | 191639 | 192685 | + | 3.A.1.15.3 |
Gene ID: HRGMv2_2825_7_172
Type: CAZyme
Location: 185087 - 186322 (-)
Type: CAZyme
Location: 185087 - 186322 (-)
Gene ID: HRGMv2_2825_7_173
Type: pfam
Location: 186491 - 187162 (+)
Type: pfam
Location: 186491 - 187162 (+)
Gene ID: HRGMv2_2825_7_174
Type: pfam
Location: 187181 - 187636 (+)
Type: pfam
Location: 187181 - 187636 (+)
Gene ID: HRGMv2_2825_7_175
Type: CAZyme
Location: 187644 - 189407 (+)
Type: CAZyme
Location: 187644 - 189407 (+)
Gene ID: HRGMv2_2825_7_176
Type: TC
Location: 189425 - 190597 (+)
Type: TC
Location: 189425 - 190597 (+)
Gene ID: HRGMv2_2825_7_177
Type: pfam
Location: 190601 - 191551 (+)
Type: pfam
Location: 190601 - 191551 (+)
Gene ID: HRGMv2_2825_7_178
Type: TC
Location: 191639 - 192685 (+)
Type: TC
Location: 191639 - 192685 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1312
Species
UMGS1312 sp900550625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.