Cluster: HRGMv2_2825_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2825
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2825_32 | HRGMv2_2825_32_3 | 1067 | 2890 | + | 3.A.25.2.1 |
| pfam | HRGMv2_2825_32 | HRGMv2_2825_32_4 | 2887 | 3444 | + | DUF308 | DUF308 | DUF308 |
| CAZyme | HRGMv2_2825_32 | HRGMv2_2825_32_5 | 3482 | 4336 | + | GT8 |
| TC | HRGMv2_2825_32 | HRGMv2_2825_32_6 | 4444 | 5583 | - | 2.A.45.2.6 |
| pfam | HRGMv2_2825_32 | HRGMv2_2825_32_7 | 5951 | 6298 | + | DUF2752 |
| pfam | HRGMv2_2825_32 | HRGMv2_2825_32_8 | 6354 | 6749 | + | TM2 | DZR |
| TC | HRGMv2_2825_32 | HRGMv2_2825_32_9 | 6891 | 9911 | - | 3.A.1.122.2 |
Gene ID: HRGMv2_2825_32_3
Type: TC
Location: 1067 - 2890 (+)
Type: TC
Location: 1067 - 2890 (+)
Gene ID: HRGMv2_2825_32_4
Type: pfam
Location: 2887 - 3444 (+)
Type: pfam
Location: 2887 - 3444 (+)
Gene ID: HRGMv2_2825_32_5
Type: CAZyme
Location: 3482 - 4336 (+)
Type: CAZyme
Location: 3482 - 4336 (+)
Gene ID: HRGMv2_2825_32_6
Type: TC
Location: 4444 - 5583 (-)
Type: TC
Location: 4444 - 5583 (-)
Gene ID: HRGMv2_2825_32_7
Type: pfam
Location: 5951 - 6298 (+)
Type: pfam
Location: 5951 - 6298 (+)
Gene ID: HRGMv2_2825_32_8
Type: pfam
Location: 6354 - 6749 (+)
Type: pfam
Location: 6354 - 6749 (+)
Gene ID: HRGMv2_2825_32_9
Type: TC
Location: 6891 - 9911 (-)
Type: TC
Location: 6891 - 9911 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1312
Species
UMGS1312 sp900550625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.