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Cluster: HRGMv2_2825_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2825_27 HRGMv2_2825_27_15 15035 16669 + 4.C.1.1.6
TC HRGMv2_2825_27 HRGMv2_2825_27_16 16709 18235 + 2.A.21.2.2
CAZyme HRGMv2_2825_27 HRGMv2_2825_27_17 18461 19978 + GH63
STP HRGMv2_2825_27 HRGMv2_2825_27_18 20173 21102 - PALP
TC HRGMv2_2825_27 HRGMv2_2825_27_19 21287 23002 + 3.A.1.135.7
TC HRGMv2_2825_27 HRGMv2_2825_27_20 23006 24736 + 3.A.1.135.5
pfam HRGMv2_2825_27 HRGMv2_2825_27_21 24755 25432 + YjbR
CAZyme HRGMv2_2825_27 HRGMv2_2825_27_22 25429 26418 + CE4
CAZyme HRGMv2_2825_27 HRGMv2_2825_27_23 26421 27137 + CE4
Gene ID: HRGMv2_2825_27_15
Type: TC
Location: 15035 - 16669 (+)
Gene ID: HRGMv2_2825_27_16
Type: TC
Location: 16709 - 18235 (+)
Gene ID: HRGMv2_2825_27_17
Type: CAZyme
Location: 18461 - 19978 (+)
Gene ID: HRGMv2_2825_27_18
Type: STP
Location: 20173 - 21102 (-)
Gene ID: HRGMv2_2825_27_19
Type: TC
Location: 21287 - 23002 (+)
Gene ID: HRGMv2_2825_27_20
Type: TC
Location: 23006 - 24736 (+)
Gene ID: HRGMv2_2825_27_21
Type: pfam
Location: 24755 - 25432 (+)
Gene ID: HRGMv2_2825_27_22
Type: CAZyme
Location: 25429 - 26418 (+)
Gene ID: HRGMv2_2825_27_23
Type: CAZyme
Location: 26421 - 27137 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UMGS1312
→
Species
UMGS1312 sp900550625

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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